DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and Tbc1d8-9

DIOPT Version :10

Sequence 1:NP_608395.6 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_649305.1 Gene:Tbc1d8-9 / 40361 FlyBaseID:FBgn0037074 Length:1291 Species:Drosophila melanogaster


Alignment Length:661 Identity:120/661 - (18%)
Similarity:219/661 - (33%) Gaps:222/661 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   628 PYLLGH----------YAFGSTTEDRKKQDETCKHYYETTMSEWLAVDAI----VQQREKEKTAR 678
            ||.:.|          .|.|.|      |||..|.:      |||..:..    ..:.|.|.|..
  Fly    56 PYRILHQTPSSEVSYEIAIGIT------QDEIVKDW------EWLKANLFKVLDEMENEDEVTNF 108

  Fly   679 AVAKLSSGSNSGN-DRTVRAADLEAGGDLENEVFEDISDISDPGDLEFDEQ----------QQQQ 732
            .:.|:.|.....| |.|..:||.:.......::|:          :..:|:          :.:.
  Fly   109 TICKIQSLYTQNNQDDTGESADFKVMKSKFRQIFK----------MPEEERLVISYSATYVKNKI 163

  Fly   733 QQQAECAVSGNHL---------TVKPIPR--------------AMKT-------------STDSG 761
            .:|.:..:|.||:         .:|.|.|              .:||             ::|:.
  Fly   164 PRQGQLYISLNHVCFYSYMLGQEIKRIIRFAELEDISRNANTIYLKTTNNMTYNFTMLFNASDAH 228

  Fly   762 HVDESFNE------LDEPD----EEDNKQKQQQDEKISESESKLPD------------YRKLEEQ 804
            .:.|..|:      :.:||    :.|.....:...|.|:....|.|            |.:|.:.
  Fly   229 LLIEQLNKMAIQQLIHDPDSPVVDHDTSNFSRLGSKTSKKPVLLRDLTARQKSEEFRIYFRLPQS 293

  Fly   805 INQEPSCSASTASSY-ETVGPGEVHQRPN-----SDTRSVLS--------PEYLSADDLQLPDDE 855
            ...:....|:..:.| :....|.::..||     ||.:.::|        ......||.|...:.
  Fly   294 EIIDGKIKANIWTPYSKRFNSGFIYLSPNFFCFRSDVKDLVSVVIPMKTIKSVEKKDDGQQRFEN 358

  Fly   856 DAV----RPPPPPAA----AAVIITK----------------ASVDITNWER------------S 884
            ..|    ...|...|    .||:|:|                |..|| :|.:            |
  Fly   359 QIVIITSENVPFMFAHIVDRAVLISKITDLLARVHVPLSRERAKYDI-SWSKQTALMNTFKTQFS 422

  Fly   885 PKAAEGDQMSPLEEQAG-ESGGAGVNM---------------DALQQP----KSACASPASSNGG 929
            .:..:..:...:..:|. ...|.|:.|               |.|:|.    .|........|.|
  Fly   423 AEIIQKQEEKMVRWEAHFRDFGRGIGMFRTTDVINLIVEGIPDKLRQEIWLIFSGAIHDKEMNPG 487

  Fly   930 VYSSELLEQFGLNLH-----RIEKDVQRCDRNYWYF-ANENLDKLRNVISTYVWEHLDVGYMQGM 988
            :| .:|:|:.....:     .|::|:.|....:..| :.:.:..||.|:..|...:..|||.|.|
  Fly   488 LY-EDLVEKAACIKNCFAHDEIDRDLPRSLPEHPAFQSTDGIGALRRVLQAYALRNPQVGYCQAM 551

  Fly   989 CDLVAPLLVIFDDESLSYSCFCKLMERMIENFPS----GGAMDMHFANMRSLIQILDSEMYDLMD 1049
             ::|:.:.::|.||..::.....|.|.::.::..    |..:|....|     :::::.:.||  
  Fly   552 -NIVSSVFLLFCDEENAFWMLASLCENLLPDYYKDKVVGAQIDQGVLN-----ELVETHLPDL-- 608

  Fly  1050 SNGDYTHF-------YFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHF------VLFLAL 1101
                :.|.       .....|||..|...:.|:          ::.||....|      :..::|
  Fly   609 ----HGHLEQLGVIKMISISWFLTIFMSVISYE----------SSLHILDCFFYEGAKIIFMISL 659

  Fly  1102 ALLETYRDIIL 1112
            .::|..||.:|
  Fly   660 QIIEWNRDKLL 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_608395.6 RUN_SGSM1_like 21..214 CDD:439049
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 35/180 (19%)
Tbc1d8-9NP_649305.1 PH-GRAM1_TCB1D8_TCB1D9_family 147..249 CDD:275404 15/101 (15%)
PH-GRAM2_TCB1D9_TCB1D9B 293..389 CDD:270161 18/95 (19%)
TBC 462..670 CDD:214540 46/230 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.