DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and RN-tre

DIOPT Version :10

Sequence 1:NP_608395.6 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_652381.1 Gene:RN-tre / 36554 FlyBaseID:FBgn0020620 Length:571 Species:Drosophila melanogaster


Alignment Length:387 Identity:75/387 - (19%)
Similarity:138/387 - (35%) Gaps:109/387 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   782 QQQDEKISESESKLPD-YRKLEEQINQEPSCSASTASSYETVGPG-EVHQRPNSDTRSVLSPEYL 844
            :||:..:..:|.:..| :|:.|  :..:||   :...|:|  .|. |::.|         :.:|.
  Fly     5 EQQEALVKRAEDEREDIFRRYE--LGLDPS---NVVDSWE--NPTFEIYHR---------TDKYG 53

  Fly   845 SADDLQLPDDEDAVRP--------------------PPPPAAAAVIITKASVD---ITNWERSPK 886
            ...|.:||...||...                    |||.......:.|...|   :..|.:.  
  Fly    54 FLHDSRLPSTRDAQEVHRNKIEMERDKKWMKMLNQWPPPQDKLHKRVYKGIPDRVRMVAWNKL-- 116

  Fly   887 AAEGDQMSPLEEQAGESGGAGVNMDALQQPKSACASPASSNGGVYSSELLEQFGLNLHRIEKDVQ 951
                     |:.|...:..|||.:..||..:.            ||:|        ..:|:.||.
  Fly   117 ---------LDIQQSINNNAGVYLRMLQLARK------------YSTE--------TRQIDADVN 152

  Fly   952 RCDRNYWYFANENLDK---LRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLM 1013
            |..|:...|......|   |.||::.|...:.::||.|||..:...||:...:|...::....:.
  Fly   153 RQFRDNLAFRERYSVKQCSLFNVLNAYSIYNSELGYCQGMACVAGVLLLYLHEEEAFWALNTLIT 217

  Fly  1014 ER-------MIENFPS-GGAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHF--------YFCYR 1062
            ::       .||.||. ...:|.|...|..:::.|             :.||        .:..:
  Fly   218 DQKYGMHGLFIEGFPKLTRFIDHHDRIMSKIMRKL-------------HKHFTKHNVDALLYAIK 269

  Fly  1063 WFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVLFLALALLETYRDIILSNSMDFTDVIKF 1124
            ||.:.|...:.:......|::..    :.....:|.:|:.:|..::|.:| ...|...:|::
  Fly   270 WFFVVFVERVPFSLSLRVWDIFM----LDGDRVILSMAITILYLHKDELL-RLKDMDAIIEY 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_608395.6 RUN_SGSM1_like 21..214 CDD:439049
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 36/182 (20%)
RN-treNP_652381.1 TBC 100..315 CDD:214540 50/262 (19%)
Blue background indicates that the domain is not in the aligned region.

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