DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and Tbc1d10c

DIOPT Version :10

Sequence 1:NP_608395.6 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001075449.1 Gene:Tbc1d10c / 361697 RGDID:1311490 Length:446 Species:Rattus norvegicus


Alignment Length:264 Identity:56/264 - (21%)
Similarity:90/264 - (34%) Gaps:62/264 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   926 SNGGVYSS--------ELLEQFGLNLHRIEKDVQRCDRNYWYFANENL---------DKLRNVIS 973
            :|.|.|..        :.:|..|.:|||             .|....:         ..|..|:.
  Rat   114 NNPGTYQELAVAPGDPQWMETIGRDLHR-------------QFPLHEMFVSPQGHGQQGLLQVLK 165

  Fly   974 TYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENF--PSGGAMDMHFANMRSL 1036
            .|.....:.||.|....:.|.||:....|. ::.|..::.|..:..:  |...|:.:......:|
  Rat   166 AYTLYRPEQGYCQAQGPVAAVLLMHLPPEE-AFWCLVQICEVYLPGYYGPHMEAVQLDAEVFMAL 229

  Fly  1037 IQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVLF--- 1098
            ::.|...:|..:...|.....|. ..|||..|.|.|.:..|...|:..     ::.|..|||   
  Rat   230 LRRLLPRVYKHLQQVGVGPLLYL-PEWFLCLFTRSLPFPIVLRIWDAF-----LSEGAKVLFRAG 288

  Fly  1099 -----LAL----------ALLETYRDIILSNSMDFTDVIKFFNEMAERHN-AQSVLQLARSLVLQ 1147
                 |||          .||||...:.........:.:    .|::.|| |.|...|.|.:.:|
  Rat   289 LTLMRLALGTVEQRTACPGLLETLGALRTIPPTQLQEEV----FMSQVHNVALSERDLQREIRIQ 349

  Fly  1148 LQMI 1151
            |..:
  Rat   350 LAQL 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_608395.6 RUN_SGSM1_like 21..214 CDD:439049
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 36/179 (20%)
Tbc1d10cNP_001075449.1 TBC 89..294 CDD:214540 40/199 (20%)
Blue background indicates that the domain is not in the aligned region.

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