DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and Tbc1d25

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001100425.1 Gene:Tbc1d25 / 302552 RGDID:1559711 Length:688 Species:Rattus norvegicus


Alignment Length:556 Identity:98/556 - (17%)
Similarity:174/556 - (31%) Gaps:255/556 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   830 RPNSDTR-----SVLSPEYLSADDLQLPDDEDAVRPPPPPAAAAVI------ITKASVDITNWER 883
            ||:.|:.     .::||:.:...|:.|.|...::.....|...:::      ::|.. .:.:|  
  Rat   125 RPSEDSPLLEDWDIISPKDVIGSDVLLADKRSSLTTAALPFTQSILSQVGRTLSKVQ-QVLSW-- 186

  Fly   884 SPKAAEGDQMSPLEEQAGESGGAGVNMDALQQPKSACASPAS-----SNGGVYSS--ELLEQFGL 941
                :.|:.:.|.:....::     ........:...:.|..     .:|||..|  :::.::.|
  Rat   187 ----SYGEDVKPFKPPLSDA-----EFHTYLNHEGQLSRPEELRLRIYHGGVEPSLRKVVWRYLL 242

  Fly   942 NLH-----------------------------------------RIEKDVQRCDRNYWYFA---- 961
            |::                                         .:.|||.|.||.:.|:|    
  Rat   243 NVYPDGLTGRERMDYMKRKSREYEQLKSEWAQRVNPEDLEFIRSTVLKDVLRTDRAHPYYAGPED 307

  Fly   962 NENLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENF-PSGGA 1025
            ..:|..|.::::||...|..|.|.|||.||.:|:|.:.|.|..::.|||.:|:|:..|| |.|.|
  Rat   308 GPHLRALHDLLTTYAVTHPQVSYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRA 372

  Fly  1026 MDMHFANMRSLIQILDSEMYD-LMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIW---- 1085
            |...||:::.|::..|.:.|. |.::..|  ..:|||||.||:.|||..:||.....||.|    
  Rat   373 MATKFAHLKLLLRHADPDFYQYLQEAGAD--DLFFCYRWLLLELKREFAFDDALRMLEVTWSSLP 435

  Fly  1086 ------------------------------------------------AAKHIASGH-------- 1094
                                                            |..|:|:..        
  Rat   436 PDPPEHEVELVGPPSQVADTGFGSHRGRPVRQRHMLRPAGGGSSAFEDAVVHLATSSQGPSSGGR 500

  Fly  1095 ----------------------------------------------------------------- 1094
                                                                             
  Rat   501 LLRQASLDGLQQLRDNMSPRKDLLVQLSHPATLISSKSLSEPLLNSPDPLLSSSSRPDSPSSSSP 565

  Fly  1095 ---------------------------------------------------FVLFLALALLETYR 1108
                                                               |:|||.||:|..:|
  Rat   566 PSTQEASPSGDVAVGSPSMPEVGSPRDPGKSVPPPPPMGLPPPQEFGRGNPFMLFLCLAILLEHR 630

  Fly  1109 DIILSNSMDFTDVIKFFNEMAERHNAQSVLQLARSL 1144
            |.|:.|.:|:.::...|:.:..:|:...||:.|::|
  Rat   631 DHIMRNGLDYNELAMHFDRLVRKHHLGRVLRRAKAL 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 64/269 (24%)
Tbc1d25NP_001100425.1 TBC 225..454 CDD:214540 63/230 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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