DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and Tbc1d8b

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001074968.1 Gene:Tbc1d8b / 245638 MGIID:1918101 Length:1114 Species:Mus musculus


Alignment Length:760 Identity:141/760 - (18%)
Similarity:251/760 - (33%) Gaps:255/760 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   518 ILQQQQQQQQQLLQAQSTSIEMVCSTMRRQIISRAFYGWLA--YCRHLST------VRTHLSGLV 574
            ||.|....|..|        .:.|...|.:|...  :.||.  ..:.||.      :...:.|.:
Mouse    65 ILHQTPDSQVYL--------SIACGANREEITKH--WDWLEQNIMKTLSVFDSNEDITNFVQGKI 119

  Fly   575 HGRITPEMK---ADEEGLTKERWQLLNVNGVL-----ENATEFYRLVYFGGVQPELRQEVWPYL- 630
            .|.|..|.|   |.|:...|.|..||......     |....:|...|:.|..|   .:.|.|| 
Mouse   120 RGLIAEEGKQSFAKEDDPEKFREALLKFEKSFGLPEQEKLVTYYSCSYWRGRVP---CQGWLYLS 181

  Fly   631 ---LGHYAF--GSTTEDRKKQDETCKHYYETTMSEWLAVDAIVQQREKEKT---ARAVAKLSSGS 687
               |..|:|  ||..:               .:..|.|:..:    ||..|   ..::...|.|.
Mouse   182 TNFLSFYSFLLGSEIK---------------LIISWDAISKL----EKTSTVILTESIHVCSQGE 227

  Fly   688 NS------------------GNDRTVRAADLEAGGDLENE-VFEDISDISDPGDLEFDEQQQQ-- 731
            |.                  .|....|..|.|.   .:|: |.:|...|:..| ||:....:|  
Mouse   228 NHYFSMFLHINETYLLMEQLANYAIKRLFDKET---FDNDPVLDDPLQITKRG-LEYRAHSEQFK 288

  Fly   732 ----------QQQQAEC---------------AVSGNHL-----------TVKPIPRAMKTSTDS 760
                      .::..||               .:|.|::           .:.|:...:      
Mouse   289 AFFRLPKEETLKEVHECFLWVPFSHFSSHGKMCISENYICFASQDGNLCSVIIPLREVL------ 347

  Fly   761 GHVDESFNELDEPDEEDNKQKQQQDEKISESESKLPDYRKLEEQI-------NQEPSCSASTASS 818
                    .:|:.|:.:.........|.:...|:|.|:.:|..::       :.:...|...|.|
Mouse   348 --------AIDKTDDSNRSVIISIKGKTAFRFSELKDFEQLVAKLRLKCRAASTQDDVSTEVAVS 404

  Fly   819 YETVGPGEVHQRPNSDTRSVLSPEYLSADDLQLPDDEDAVRPPPPPAAAAVIITKASVDITNWER 883
            .::.||.|     |.:.:.:..|:..|                      ..:.|:|.:.:.:   
Mouse   405 SDSTGPSE-----NFEEQPLTCPKECS----------------------KTVNTEALMTVFH--- 439

  Fly   884 SPKAAEGDQMSPLEEQAGESG--------GAGVNMDALQQPK-------------------SACA 921
             |:..|......|:|:..|..        |.||:|...::.:                   |...
Mouse   440 -PQNLENLDSKMLKEKMKEQSWNILFSECGRGVSMFRTKKTRDLVVRGIPETLRGELWMLFSGAV 503

  Fly   922 SPASSNGGVYSSELLEQ----FGLNLHRIEKDVQRCDRNYWYFANE-NLDKLRNVISTYVWEHLD 981
            :..::|.|.| :|::||    ..|....||:|::|....:..|.:: .:..||.|::.|.:.:..
Mouse   504 NDMATNPGYY-AEVVEQSLGTSNLATEEIERDLRRSLPEHPAFQSDTGISALRRVLTAYAYRNPK 567

  Fly   982 VGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIENFPSGGAMDMHFANMRSLIQILDSEMYD 1046
            :||.|.| :::..:|:::..|..::.....:.|||:.:          :.|.|.:..::|..:::
Mouse   568 IGYCQAM-NILTSVLLLYAKEEEAFWLLVAVCERMLPD----------YFNRRIIGALVDQAVFE 621

  Fly  1047 ---------LMDSNGDYTHF-YFCYRWFLLDFKREL------------VYDDVFATWEVIWAAKH 1089
                     |.|...|.|.| .....|||..|...|            .||.:.|          
Mouse   622 ELIRDHLPQLTDHMTDMTFFSSVSLSWFLTLFISVLPIESAVNVVDCFFYDGIKA---------- 676

  Fly  1090 IASGHFVLFLALALLETYRDIILSNSMD---FTDVIKFFNEMAER 1131
                  :|.|.||:|:...|.:|:...|   .|.:.:||:.:..:
Mouse   677 ------ILQLGLAILDYNLDKLLTCKDDAEAVTALNRFFDNVINK 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 41/190 (22%)
Tbc1d8bNP_001074968.1 PH-GRAM1_TBC1D8B 156..254 CDD:275419 22/119 (18%)
PH-GRAM2_TBC1D8B 296..388 CDD:270159 12/105 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 399..420 6/25 (24%)
TBC 485..693 CDD:214540 48/235 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 938..957
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1032..1061
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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