DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and Tbc1d17

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_001036120.1 Gene:Tbc1d17 / 233204 MGIID:2449973 Length:645 Species:Mus musculus


Alignment Length:586 Identity:143/586 - (24%)
Similarity:226/586 - (38%) Gaps:154/586 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   638 STTEDRKKQDETCKHYYETTMSEWLAVDAIVQQ---REKEKTARAVAKLSSGSNS---GNDRTVR 696
            ||:|    ::.|....||   .:|..:..:..|   .|..|.|...:..||.:.|   |..:::|
Mouse    72 STSE----EEPTFDPGYE---PDWAVISTVRPQPHLAEPRKGAEPSSSRSSWAFSVSLGELKSIR 129

  Fly   697 AAD-----------LEAGGDLENEVFEDISDISDPGDLEFDEQQQQQQQQAECAVSGNHLTVKPI 750
            .:.           .:|||.|             |. |.|    .:...:|...|...:|.:...
Mouse   130 RSKPGLSWAYLVLVTQAGGSL-------------PA-LHF----HRGGTRALLRVLSRYLLLASS 176

  Fly   751 PRAMKT----STDSGHVDESFNELDEPDEEDNKQKQQQDEKISESESKLPDYRKLEEQINQEPSC 811
            |:..:.    ..|...:.:||:.|...|:                     |...:..:..|:|  
Mouse   177 PQDSRLYLVFPQDPSALSDSFHHLQLFDQ---------------------DSSNVVSRFLQDP-- 218

  Fly   812 SASTASSYETV-----GPGEVHQRPNSDTRSVLSPEYLSADDL-QLPDDEDAVRPPPPPAAAAVI 870
            .::|.||:..|     |..:.|            ||..|:.:| .|||||      |.|....:.
Mouse   219 YSTTFSSFSRVTNFFRGALQPH------------PEGASSPNLPPLPDDE------PEPGFEVIS 265

  Fly   871 ITKASVDITNWERSPKAAEGD-----------QMSPLEEQAGESGG--AGVNMDALQ-------- 914
            ..:.....| .||:|...|.:           |..|..:....|||  .|:..:|.:        
Mouse   266 CVELGQRPT-VERAPPVTEEEWNRYVGPEGRLQNVPELKNRIFSGGLSPGLRREAWKFLLGYLSW 329

  Fly   915 -----------------------QPKSACASPASSNGGVYSSELLEQFGLNLHRIEKDVQRCDR- 955
                                   |.||..|.....|..::....|         ||:||.|.|| 
Mouse   330 ESSAEEHKAHVRKKTDEYFRMKLQWKSVSAEQERRNSLLHGYRSL---------IERDVSRTDRT 385

  Fly   956 NYWYFANEN--LDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCKLMERMIE 1018
            |.:|...||  |..|.:::.||...|.|:||:|||.||::|:|.:..:|..::.|||..||.:..
Mouse   386 NKFYEGPENPGLSLLHDILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDAFWCFCGFMELVHG 450

  Fly  1019 NF-PSGGAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWE 1082
            || .|...|......:..|:::||..:.|.:||. |.....||:||.|:.||||..:.||...||
Mouse   451 NFEESQETMKRQLGQLLLLLRVLDQPLCDFLDSQ-DSGSLCFCFRWLLIWFKREFPFPDVLRLWE 514

  Fly  1083 VIWAAKHIASGHFVLFLALALLETYRDIILSNSMDFTDVIKFFNEMAERHNAQSVLQLARSLVLQ 1147
            |:|..  :...:..|.:|.|:|:..||.::.:.....:::|..||:..:.:.:.||..|.:|..|
Mouse   515 VLWTG--LPGPNLHLLVACAILDMERDTLMLSGFGSNEILKHINELTMKLSVEDVLTRAEALYRQ 577

  Fly  1148 L 1148
            |
Mouse   578 L 578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 60/167 (36%)
Tbc1d17NP_001036120.1 DUF3548 3..217 CDD:192931 33/190 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..85 4/16 (25%)
Required for interaction with OPTN. /evidence=ECO:0000250 217..309 25/112 (22%)
TBC 307..542 CDD:214540 75/246 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 596..645
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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