DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and tbc-16

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:NP_508988.3 Gene:tbc-16 / 180856 WormBaseID:WBGene00018639 Length:725 Species:Caenorhabditis elegans


Alignment Length:985 Identity:180/985 - (18%)
Similarity:304/985 - (30%) Gaps:446/985 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   283 VESLHQNAKATLLYGKNNVQVLPKDV-----AEPMPGYLSLHQHIQ-----TLTIKWTPNQLM-- 335
            |.|........::|.||||.|...|.     ....||||::|....     ||.::|.||..:  
 Worm    21 VNSFFLGRDGDVVYSKNNVCVHETDAKAGEDEAHCPGYLTVHCQCDESMGLTLILQWLPNLTLQK 85

  Fly   336 ------------------NGYT-EAEEAEDI------DKDAFWAYALNINVDEIVYVHCHQSRGE 375
                              ||.. .|:.|:::      |:::  :.:|:|.::|     |      
 Worm    86 NPQSIRSVSPRGKQNRDENGQAMPAKPADEVKVSLLSDEES--SVSLDIQIEE-----C------ 137

  Fly   376 DSGGTVILVGQDGVQRPPIHFPEGGHMQQFLSCLETGLLPHGQLDPPLWSQRGIGKMFLWPRSMR 440
               ||.:.|.|  |:||                  |.|:|:||.:...::. .:|          
 Worm   138 ---GTAVPVKQ--VKRP------------------TTLVPYGQQEDHSFND-ALG---------- 168

  Fly   441 RRILPSVMESVDETPIDYVFRIV--SKSRHEEFAATHSILDFVRSTPRRAQLS----SCSTTGSS 499
               :||: ..:..|||.:....:  ..::.|....:.|.|    ||....::|    |.|..|..
 Worm   169 ---VPSI-NVIPHTPIKHENNEIRTENAKDESDKMSQSSL----STSCADEMSDKELSSSEDGDD 225

  Fly   500 DCSNKSLSI----------------DQFPMESPLIL------QQQQQQQQQLLQAQSTSIEMVCS 542
            ||......:                :||.:|..|:|      ..::|.:.:...|.:||:..|..
 Worm   226 DCEKPDPGVGLEKILESTQMFDKTPEQFALEHDLMLTDTKSNDSEEQSRGRKKAAGTTSLFSVNL 290

  Fly   543 TMRRQIISRAFY-------GWLAYC---RHLSTVRTHLSGL------------VHGR-------- 577
            ...|.:  |.||       |.|...   .|...:..|..||            :..|        
 Worm   291 GKMRSM--RVFYSNTECTSGQLVIATLDSHYKILHFHHGGLDKLAYIFEQWSSIKARSVQEGSPS 353

  Fly   578 -------------ITPEMKADEEGL----TKERWQLL-NVNGVLENATEFYRLVYFGGVQPELRQ 624
                         :|...|..||||    |...|:.. |.:||:.::....:.::|..:..|:|:
 Worm   354 AIADKQLIICQPAVTKVEKDPEEGLFEKITLNTWRSYENKSGVIIDSGTVRKHIFFASMDVEMRE 418

  Fly   625 EVWPYLLGHYAFGSTTEDRKKQDETCKHYYETTMSEWLAVDAIVQQREKEKTARAVAKLSSGSNS 689
            :|||:||..|.:.|:.:.|:                                             
 Worm   419 KVWPFLLRVYPWESSADQRE--------------------------------------------- 438

  Fly   690 GNDRTVRAADLEAGGDLENEVFEDISDISDPGDLEFDEQQQQQQQQAECAVSGNHLTVKPIPRAM 754
                           :::|::|           ||:                             
 Worm   439 ---------------NIKNDLF-----------LEY----------------------------- 448

  Fly   755 KTSTDSGHVDESFNELDEPDEEDNKQKQQQDEKISESESKLPDYRKLEEQINQEPSCSASTASSY 819
                                  .|.:|::              ||..|                 
 Worm   449 ----------------------QNIRKRR--------------YRVTE----------------- 460

  Fly   820 ETVGPGEVHQRPNSDTRSVLSPEYLSADDLQLPDDEDAVRPPPPPAAAAVIITKASVDITNWERS 884
                        |:..|.:                                    |::       
 Worm   461 ------------NAQARWI------------------------------------SIE------- 470

  Fly   885 PKAAEGDQMSPLEEQAGESGGAGVNMDALQQPKSACASPASSNGGVYSSELLEQFGLNLHRIEKD 949
                                                                       :.|.||
 Worm   471 -----------------------------------------------------------NSIVKD 476

  Fly   950 VQRCDRNYWYFA---NENLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESLSYSCFCK 1011
            |.|.||...:||   |.|.:.::|::..|...:.|:.|:|||.||:||||....||..||.||..
 Worm   477 VVRTDRKNPFFAGDNNPNSEIMKNILLNYAVMYPDINYIQGMSDLLAPLLSTLKDEVDSYFCFKN 541

  Fly  1012 LMERMI-ENFPSG--GAMDMHFANMRSLIQILDSEMYD-LMDSNGDYTHFYFCYRWFLLDFKREL 1072
            .|::.: .:.|.|  ..|:.:...:|:::::...:.|: |.....|.....|.:||.||.||||.
 Worm   542 FMQQTVFSSTPQGNENLMETNLTYLRNMLRMFVPDFYEHLEKQRPDAMQLMFVHRWILLCFKREF 606

  Fly  1073 VYDDVFATWEVIWAAKHIASGHFVLFLALALLETYRDIILSNSMDFTDVIKFFNEMAERHNAQSV 1137
            ..:.....||..||  |..:.:|.||:.:|::..|...:|:..:...:::.||..:|...:|..|
 Worm   607 PENYALHIWECCWA--HYRTNYFHLFVCVAIVSIYGKDVLTQDLPHDEILLFFASLANHMDATLV 669

  Fly  1138 LQLARSLVLQ 1147
            ||.||.|:.:
 Worm   670 LQKARGLLFE 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431 44/212 (21%)
TBC 923..1087 CDD:214540 50/170 (29%)
tbc-16NP_508988.3 DUF3548 32..>136 CDD:371881 24/105 (23%)
TBC 415..644 CDD:214540 79/497 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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