Sequence 1: | NP_001285494.1 | Gene: | tbc / 318059 | FlyBaseID: | FBgn0052506 | Length: | 1155 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001035037.1 | Gene: | SGSM1 / 129049 | HGNCID: | 29410 | Length: | 1148 | Species: | Homo sapiens |
Alignment Length: | 1269 | Identity: | 546/1269 - (43%) |
---|---|---|---|
Similarity: | 733/1269 - (57%) | Gaps: | 250/1269 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 SDYKERLIASVKKEVKQLMEEAVTKKYVHEESSSVTSLCGAVEACLSQGLRRRALGLFKTSSTTA 73
Fly 74 LLHKIAKSCPEAEHISKLVQEIEASDPSKRS--SSSSDSFQRPPMLKKSSSNSMSTGTNAAASTS 136
Fly 137 SASASISVSASTSSMSLASMKYLWIRLALYEKRLTKIIEYLVSNASSFYDRDSLVADSDYGSILS 201
Fly 202 SLLVGPCALEFTRAKTADHYWTDPHADELVQRHRI-SSCRRSSSTCSRPAIINFKRSLNTSSDEA 265
Fly 266 GTGSFKSIASASVAKDYVESLHQNAKATLLYGKNNVQVLPKDVAEPMPGYLSLHQHIQTLTIKWT 330
Fly 331 PNQLMNGYTEAEEAEDID--KDAFWAYALNINVDEIVYVHCHQSRGEDSGGTVILVGQDGVQRPP 393
Fly 394 IHFPEGGHMQQFLSCLETGLLPHGQLDPPLWSQRGIGKMFLWPRSMRRRILPSVMESV-----DE 453
Fly 454 TPIDYVFRIVSKSRHEEFAATHSILDFVRST---------------------------------- 484
Fly 485 --------------------------------PRRAQLSSCSTTGSSD-CSNKSLSIDQFPMESP 516
Fly 517 LILQQQQQQQQQLLQAQSTSIEMVCSTMRRQIISRAFYGWLAYCRHLSTVRTHLSGLV-HGRITP 580
Fly 581 EMKADE-EGLTKERWQLLNVNGVLENATEFYRLVYFGGVQPELRQEVWPYLLGHYAFGSTTEDRK 644
Fly 645 KQDETCKHYYETTMSEWLAVDAIVQQREKEKTARAVAKLSSGSN--------------------- 688
Fly 689 --SGNDRTVRAADLEAGGDLENEVFEDISDISDPGDLEFDEQQQQQQQQAECAVSGNHL--TVKP 749
Fly 750 IPRAMKTSTDSGHVDESFNELDEPDEEDNKQKQQQDEKISESESKLPD-YRKLEEQINQEPSCSA 813
Fly 814 STASSYETVGPGE---VHQRPNSDTRSVLS-PEYLSAD---DLQLPDDEDAVRPPPPPAAAAVII 871
Fly 872 TKASVDITNWERS--PKAAEGDQMSPLEEQAGESGGAGVNMDALQQPKSACA--------SPASS 926
Fly 927 NGGVYSSELLEQFGLNLHRIEKDVQRCDRNYWYFANENLDKLRNVISTYVWEHLDVGYMQGMCDL 991
Fly 992 VAPLLVIFDDESLSYSCFCKLMERMIENFPSGGAMDMHFANMRSLIQILDSEMYDLMDSNGDYTH 1056
Fly 1057 FYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVLFLALALLETYRDIILSNSMDFTDV 1121
Fly 1122 IKFFNEMAERHNAQSVLQLARSLVLQLQMIIENK 1155 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
tbc | NP_001285494.1 | RUN | 45..218 | CDD:280855 | 65/174 (37%) |
PH_RUTBC | 292..466 | CDD:275431 | 107/180 (59%) | ||
TBC | 923..1087 | CDD:214540 | 119/163 (73%) | ||
SGSM1 | NP_001035037.1 | RUN | 44..188 | CDD:280855 | 65/174 (37%) |
PH_RUTBC | 254..425 | CDD:275431 | 107/180 (59%) | ||
Important for interaction with RAB9A and RAB9B. /evidence=ECO:0000250|UniProtKB:Q8BPQ7 | 256..297 | 27/40 (68%) | |||
Required for interaction with RAP family members | 301..350 | 28/50 (56%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 377..411 | 17/36 (47%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 700..830 | 24/152 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 871..894 | 6/30 (20%) | |||
TBC | <936..1105 | CDD:214540 | 127/168 (76%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 297 | 1.000 | Domainoid score | I1464 |
eggNOG | 1 | 0.900 | - | - | E1_COG5210 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H64485 | |
Inparanoid | 1 | 1.050 | 943 | 1.000 | Inparanoid score | I343 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3548 |
OMA | 1 | 1.010 | - | - | QHG48923 | |
OrthoDB | 1 | 1.010 | - | - | D171826at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002045 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8482 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103962 | |
Panther | 1 | 1.100 | - | - | O | PTHR22957 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3416 |
SonicParanoid | 1 | 1.000 | - | - | X1347 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.820 |