DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbc and sgsm1b

DIOPT Version :10

Sequence 1:NP_608395.6 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_073770421.1 Gene:sgsm1b / 100535556 ZFINID:ZDB-GENE-091117-39 Length:1497 Species:Danio rerio


Alignment Length:1581 Identity:576/1581 - (36%)
Similarity:777/1581 - (49%) Gaps:521/1581 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SDYKERLIASVKKEVKQLMEEAVTKKYVHEESSSVTSLCGAVEACLSQGLRRRALGLFKTSSTTA 73
            |:.::||:.:|||||||:||||||:|:|||:||.:.|.||.||||:..||:|||.|..:::...|
Zfish     4 SETRQRLLRNVKKEVKQIMEEAVTRKFVHEDSSHIISFCGVVEACVLHGLKRRAAGFLRSNKLAA 68

  Fly    74 LLHKIAKSCPEAEHISKLVQEIEASDPSKRSSS--SSDSFQ---RPPMLKKSSSNSMSTGTNAAA 133
            |..|:.|..|.||.:.:.|||:|....:|::.|  |.:|.:   |||                  
Zfish    69 LFMKVGKMFPPAEDLCRKVQELEQIIENKQNQSQMSQESVRKQPRPP------------------ 115

  Fly   134 STSSASASISVSASTSSMSLASMKYLWIRLALYEKRLTKIIEYLVSNASSFYDRDSLVADSDYGS 198
                            ::|..::|:||||.||.:|.|.||:.|||.|:|.||:|::|:.|...|.
Zfish   116 ----------------NLSPLAIKHLWIRTALTQKLLDKIVLYLVENSSKFYEREALLRDPVDGP 164

  Fly   199 ILSSLLVGPCALEFTRAKTADHYWTDPHADELVQRHRISS--CRRSSSTCSRPAIINFKRSLNTS 261
            ||:||||||||||:|:||||:|:||||.||||||||||.|  ||:.|.| .|||:|..::|..:.
Zfish   165 ILASLLVGPCALEYTKAKTANHFWTDPSADELVQRHRIHSGHCRQDSPT-KRPALIQKRQSSGSM 228

  Fly   262 SDEAGTGSFKSIASASVAKDYVESLHQNAKATLLYGKNNVQVLPKDVAEPMPGYLSLHQHIQTLT 326
            .|.....          |:|||||||||::||||:|||||.|.|.|..|.:||||||||....:|
Zfish   229 DDRPSLW----------ARDYVESLHQNSRATLLFGKNNVLVQPTDDMEAIPGYLSLHQTADLMT 283

  Fly   327 IKWTPNQLMNGYTEAEEAEDIDKDAFWAYALNINVDEIVYVHCHQSRGEDSGGTVILVGQDGVQR 391
            :||||||||||.||.    |.:|..:|.:|:.|.::||||:||||.  .||||||:||.|||:||
Zfish   284 LKWTPNQLMNGNTEF----DYEKSVYWDFAMTIRLEEIVYLHCHQQ--VDSGGTVVLVSQDGIQR 342

  Fly   392 PPIHFPEGGHMQQFLSCLETGLLPHGQLDPPLWSQRGIGKMFLWPRSMRRRILPSVMESV----D 452
            ||..||:|||:.|||:|||||||||||||||||||||.||:|  |: :|:|......||.    :
Zfish   343 PPFRFPKGGHLLQFLTCLETGLLPHGQLDPPLWSQRGKGKVF--PK-LRKRSPHGSCESFSDKDE 404

  Fly   453 ETPIDYVFRIVSKSRHEEFAATHSI---LDFVRSTPRRAQLSSCSTTGSSD------CSNKSLSI 508
            :...||||||:... .:||.|...|   ::..:.|||::..||||..||||      |::     
Zfish   405 DEATDYVFRIIYPG-SQEFVAPELIEQAVNMWQPTPRKSSCSSCSQNGSSDGGLPNGCNH----- 463

  Fly   509 DQFPMESPLILQQQQQQQQQLLQAQSTSIEMVCSTMRRQIISRAFYGWLAYCRHLSTVRTHLSGL 573
            |:.|                        ::::|.||:.|||||||||||||||||||||||||.|
Zfish   464 DRAP------------------------LKLLCETMKHQIISRAFYGWLAYCRHLSTVRTHLSAL 504

  Fly   574 VHGRIT-PEMKADEE-GLTKERWQLLNVNGVLENATEFYRLVYFGGVQPELRQEVWPYLLGHYAF 636
            |:..|. |::..|.: ||:.:.|:....:.......|..||||:|||:|.||:||||:|||||.|
Zfish   505 VNATIVEPDIPYDAKGGLSADVWKSFLQDCSAYEEEELLRLVYYGGVEPSLRKEVWPFLLGHYHF 569

  Fly   637 GSTTEDRKKQDETCKHYYETTMSEWLAVDAIVQQREKEKTARAVAKLSSGSN----SGNDRTVRA 697
            ..:.|:||:.||..:..||.||||||..:|||:|||||:.|.|:||.:||::    |..|.|:..
Zfish   570 TMSPEERKEVDEQIRACYEQTMSEWLGCEAIVRQREKEQHAAALAKCASGASVDRGSRQDSTIST 634

  Fly   698 -------------ADLEAGGDLENEVFEDISDISDPGDLE---FDEQQQQQ-------------- 732
                         |...:..:...:||..:.:: ||.:.|   .||:.|.:              
Zfish   635 DSSQSSNSDKQSHAGSHSDSNSSTQVFGSVDEV-DPIESEPKPKDEKPQPKIPNGALPNCTSSPD 698

  Fly   733 ------------QQQAECAVS----------GNHLTVKPIPR----------------------- 752
                        ...::|:.|          ||...::..|:                       
Zfish   699 SGHPSSRNFSVTSAMSDCSPSTEETSTQESKGNQPDIEEKPKEEQPENSSTTQNTDKAAITTQNK 763

  Fly   753 -AMKTSTDS--------GHVDESFNELDEPDE--------------------------------- 775
             .::||..|        ..:.::...|.||.|                                 
Zfish   764 SKLQTSETSRAETDQIKDAISKNPTNLSEPKEDEVNAGAETRKSEVNKCEVQPSRDPAEESRSSE 828

  Fly   776 --------------------------------EDNKQKQQQDE---------------------- 786
                                            ||:|.:|...|                      
Zfish   829 SKQAEDADPVSLSIVDEDTKSNTEQEIGLKVNEDSKSQQSAPESTPEDVKTSQNLSSESNTKQET 893

  Fly   787 --KISE----------------------------------------------------------- 790
              |:||                                                           
Zfish   894 SLKVSEDSKCQPSAPESTSEAMTTSQNLSSESNTEQETGLKVNEDSKCQPSAPESTSEDMKTSQN 958

  Fly   791 --SES----------------------KLPDYRKLEE--------------QINQEPSCSASTAS 817
              |||                      ..|::.|..:              ::|::..|..|...
Zfish   959 ISSESNTEQETGLKVNKDSKSEQSAPKSTPEHMKTSQNLLSELNMEQATGLKVNEDSKCQPSAPE 1023

  Fly   818 ------------SYETVGPGEVHQRPNSDTRSVLS-----PEYLSADDLQLPD-----------D 854
                        |.|:....|...:.|.|::|..|     ||::......|.:           :
Zfish  1024 STPEAMKTSQNISSESNTQQETGLKVNKDSKSEQSAPKSTPEHMKTSQNLLSELNMEQATGLKVN 1088

  Fly   855 EDAVRPPPPP-----------------------------------AAAAVI-------------- 870
            ||:...|..|                                   .|.::|              
Zfish  1089 EDSKCQPSAPESTLDDMKTSQNLSSGPQNVPQTAPQTISWDSEHNRARSIIKQMTESESESCGPL 1153

  Fly   871 --ITKASVDITNWERSPKAAEGDQM---------------SPLE--------EQAGESGGAGV-- 908
              ::|.|.|::  :.||.|.|.:::               :||.        ..|||....|:  
Zfish  1154 TSLSKPSPDMS--DDSPSALEMEEIPSSVVYMSSETSMCRTPLTLARPVAPCIAAGEKSPMGMPA 1216

  Fly   909 -------------------------NMD---------ALQQPKSACASPASSNGGVYSSELLEQF 939
                                     .||         |:...|:..|||.||.|..||.||::.:
Zfish  1217 LELCMEPGVNTTPEGTDSALSEEEPEMDNLFPKPDSLAVTGDKNDIASPVSSIGTTYSQELVDLY 1281

  Fly   940 GLNLHRIEKDVQRCDRNYWYFANENLDKLRNVISTYVWEHLDVGYMQGMCDLVAPLLVIFDDESL 1004
            .||||||:|||||||||||||...||:||||::.:|||:|||:||:||||||:||||||.|||::
Zfish  1282 TLNLHRIDKDVQRCDRNYWYFTPANLEKLRNIMCSYVWQHLDIGYVQGMCDLLAPLLVILDDEAM 1346

  Fly  1005 SYSCFCKLMERMIENFPSGGAMDMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFK 1069
            ::|||.:||:||.:|||.|||||.|||||||||||||||:::||..|||||||||||||||||||
Zfish  1347 AFSCFTELMKRMNQNFPHGGAMDTHFANMRSLIQILDSELFELMQQNGDYTHFYFCYRWFLLDFK 1411

  Fly  1070 RELVYDDVFATWEVIWAAKHIASGHFVLFLALALLETYRDIILSNSMDFTDVIKFFNEMAERHNA 1134
            ||:||||||:.||.||||::.:|.|||||:||||:|.||||||.|:|||||:|||||||||||:.
Zfish  1412 REMVYDDVFSVWETIWAARYASSEHFVLFIALALVELYRDIILENNMDFTDIIKFFNEMAERHDV 1476

  Fly  1135 QSVLQLARSLVLQLQMIIENK 1155
            ..:|.:||.||.::|::||||
Zfish  1477 PKLLVMARDLVHKVQILIENK 1497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_608395.6 RUN_SGSM1_like 21..214 CDD:439049 83/197 (42%)
PH_RUTBC 292..466 CDD:275431 105/177 (59%)
TBC 923..1087 CDD:214540 119/163 (73%)
sgsm1bXP_073770421.1 None

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