DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbc and tbc1d12b

DIOPT Version :9

Sequence 1:NP_001285494.1 Gene:tbc / 318059 FlyBaseID:FBgn0052506 Length:1155 Species:Drosophila melanogaster
Sequence 2:XP_005169505.1 Gene:tbc1d12b / 100332088 ZFINID:ZDB-GENE-121214-108 Length:771 Species:Danio rerio


Alignment Length:631 Identity:128/631 - (20%)
Similarity:203/631 - (32%) Gaps:222/631 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   701 EAGGDLENEVFEDISDISDPGDLEFDEQQQQQQ------QQAECAVSGNH----LTVKPIPRAMK 755
            |||..||.:..|.:..:        |:.::...      |.:||.....|    .:..|:..:::
Zfish   161 EAGESLETQAGETLEAL--------DQAERSSTDHCLGLQSSECNEGKLHRRSSTSPSPLKHSLR 217

  Fly   756 T-------STDSGHV--------DESFNELDEPDE----------------------EDN----- 778
            |       :|||..:        ||:|:..|.||:                      .||     
Zfish   218 TFSSSTFLNTDSASLSPNDDDDEDETFSTSDRPDDLRFMDVSLKSRNTYEISRRQSAPDNIPGVL 282

  Fly   779 ---------------------------KQKQQQDE-------KISESESKLPDYRKLEEQINQEP 809
                                       ||::.|..       |:...||...|.:.::::.|...
Zfish   283 SVAAVDLTLGQRKQGISDIFSRSLFTRKQREAQSAPGWKLFGKVPLRESPPKDSKTIQQESNPGN 347

  Fly   810 SCSAST-----ASSYE--TVGPGEVHQRPNSDTRSVLSPEYLSADDLQLPDDEDAVRPPPPPAAA 867
            ..|.||     :..||  ....|:....|....|..|..|.||...|.|.|     ||...||.:
Zfish   348 LTSVSTPNLLSSGEYEAKVCKSGQSPSLPAQSRRKNLEFEPLSTTALILED-----RPANLPAKS 407

  Fly   868 A-----------VIITKASVDITNWERSPKAAE--GDQMSPLEEQAGESGGAGV--NMDALQQPK 917
            .           .::.:|.      :|..|.|:  ..||....:|......|.|  |.:.|...:
Zfish   408 EEEAQRHRQEYDEMVAEAK------KRELKEAQKKKKQMKERFKQEESIANAMVVWNTEILPNWE 466

  Fly   918 SACAS-----------PASSNGGVYS----------SELLEQFGLNLHR--------------IE 947
            |...:           |.:..|.|:|          |:|.|.|   |.|              ||
Zfish   467 SMRGTRRVRDLWWQGLPPNVRGKVWSLAVGNELNITSDLYEIF---LSRAKERWKSFRETGSEIE 528

  Fly   948 KDVQRCDR----------------NYWYF--ANENLDKLRNVISTYVWEHLDVGYMQGMCDLVAP 994
            .||...||                :.:.|  .....|.|.:|:..|.....||||:||| ..:|.
Zfish   529 SDVDSADRESSLDLIKLDISRTFPSLFIFQKGGPYHDLLHSVLGAYTCYRPDVGYVQGM-SFIAA 592

  Fly   995 LLVIFDDESLSYSCFCKLM-------------ERMIENFPSGGAMDMHF-ANMRSLIQILDSEMY 1045
            :|::..:|:.::..|..|:             |.|::.|   .|.::.| .|:..|.....|  |
Zfish   593 VLILNLEEADAFIAFANLLNKPCQMAFFRVDHELMLKYF---AAFEVFFEENLPRLFNHFKS--Y 652

  Fly  1046 DLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIASGHFVLF-LALALLETYRD 1109
            :|       |...:...|....:.:.|..|.....|:|.     ...|...|| ..|.:|..|.:
Zfish   653 NL-------TPDLYLIDWIFTLYAKSLPLDVACRVWDVF-----CRDGEEFLFRTGLGILRLYEE 705

  Fly  1110 IILSNSMDFTDVIKFFNEMAERHNAQSVLQLARSLVLQLQMIIENK 1155
            ::|  .|||....:|...:.:....:.:.    |.:...|||..|:
Zfish   706 LLL--QMDFIHSAQFLTRLPDDTPPERLF----SCIASTQMISSNR 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbcNP_001285494.1 RUN 45..218 CDD:280855
PH_RUTBC 292..466 CDD:275431
TBC 923..1087 CDD:214540 49/219 (22%)
tbc1d12bXP_005169505.1 TPX2 407..>451 CDD:284337 7/49 (14%)
TBC 478..708 CDD:214540 55/250 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.