DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gss2 and GSH2

DIOPT Version :9

Sequence 1:NP_728118.2 Gene:Gss2 / 318053 FlyBaseID:FBgn0052495 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_014593.1 Gene:GSH2 / 854108 SGDID:S000005409 Length:491 Species:Saccharomyces cerevisiae


Alignment Length:567 Identity:174/567 - (30%)
Similarity:275/567 - (48%) Gaps:118/567 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 PLAEDELLEVTAKAKDYAIMHGAAM-RSKTAFSPDSLNFAPFVLVPSSFPRKEFEKAVALQPIIN 80
            |.::|:|.|:..:...:||.:|.:| ..|...:|.:.:.:|..:.|:..|||.|::||.:||:.|
Yeast     5 PPSKDQLNELIQEVNQWAITNGLSMYPPKFEENPSNASVSPVTIYPTPIPRKCFDEAVQIQPVFN 69

  Fly    81 ----RLMHNVAHDEEFI-TTTLAETIKVDEFTANLFNIYRKVL--AHGFTQKTSLGMLRSDLMLE 138
                |:..::|..:.:: .||.|..:...|||..|:::|...|  |....|...||:.|||.:::
Yeast    70 ELYARITQDMAQPDSYLHKTTEALALSDSEFTGKLWSLYLATLKSAQYKKQNFRLGIFRSDYLID 134

  Fly   139 SGCPELSPRALRTAAGEDRGQDAGAAVGQIAGANGAAGVGTAAGTGSKEEEHREVQLSRVTKEPE 203
                            :.:|.:      ||                                   
Yeast   135 ----------------KKKGTE------QI----------------------------------- 142

  Fly   204 RRATGAQSAYCCWKQVEINTIASGFGHLGPASKTIQRFVLSELGHADK------LHNMPDNNALA 262
                         ||||.||::..|..|   |:.:.| :.|.|..|:|      ::|  |.|.:.
Yeast   143 -------------KQVEFNTVSVSFAGL---SEKVDR-LHSYLNRANKYDPKGPIYN--DQNMVI 188

  Fly   263 G-----LCDGMVKAWDIYAKPQA-------VILFIIEDVSYNICDQRFHEFYIRETYPHIKVLRR 315
            .     |...:.||.:.|...|:       ::.||::....|:.||:..|..:.|.: ..|.:|.
Yeast   189 SDSGYLLSKALAKAVESYKSQQSSSTTSDPIVAFIVQRNERNVFDQKVLELNLLEKF-GTKSVRL 252

  Fly   316 TLTEVH-------REGKLG-QSKELLLGSQEVAVIYFRAGYEPGHYHSQADWDARYLMETSLAIK 372
            |..:|:       :.|||. :..|     ||:||:|:|.||....|.|:.||:||..:|.|.|||
Yeast   253 TFDDVNDKLFIDDKTGKLFIRDTE-----QEIAVVYYRTGYTTTDYTSEKDWEARLFLEKSFAIK 312

  Fly   373 CPSIHYHLAGTKKVQQALAQPAVLERFINDPEEIKAVGKIFTGLYSLDDNEAGNASYEMALRTPE 437
            .|.:...|:|:||:||.|....||.::|:|.|:..::.|.|..:|.|||.:.|.....:||..|.
Yeast   313 APDLLTQLSGSKKIQQLLTDEGVLGKYISDAEKKSSLLKTFVKIYPLDDTKLGREGKRLALSEPS 377

  Fly   438 RFVLKPQREGGGNNVYGVDIPDALKRMSRVERSAWILMDLIHPPLTKGYMVRPGGDMPPQIVDMV 502
            ::||||||||||||||..:||:.||.:......|:|||:||.|.|.:..::.  .|.......::
Yeast   378 KYVLKPQREGGGNNVYKENIPNFLKGIEERHWDAYILMELIEPELNENNIIL--RDNKSYNEPII 440

  Fly   503 SELGIFGVVIGDAEHIVHNYQAGHMLRTKLSTANEGGVAAGLGALDS 549
            |||||:|.|:.:.|.::.|..:|.:||:|.:|:||||||||.|.|||
Yeast   441 SELGIYGCVLFNDEQVLSNEFSGSLLRSKFNTSNEGGVAAGFGCLDS 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gss2NP_728118.2 GSH_synth_ATP 20..552 CDD:281854 173/564 (31%)
GSH2NP_014593.1 glut_syn_euk 11..490 CDD:273912 172/561 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343897
Domainoid 1 1.000 200 1.000 Domainoid score I567
eggNOG 1 0.900 - - E1_KOG0021
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H148
Inparanoid 1 1.050 259 1.000 Inparanoid score I629
Isobase 1 0.950 - 0 Normalized mean entropy S1620
OMA 1 1.010 - - QHG54115
OrthoFinder 1 1.000 - - FOG0005180
OrthoInspector 1 1.000 - - oto99032
orthoMCL 1 0.900 - - OOG6_101596
Panther 1 1.100 - - LDO PTHR11130
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R528
SonicParanoid 1 1.000 - - X3696
TreeFam 1 0.960 - -
1615.740

Return to query results.
Submit another query.