DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gss2 and GSH2

DIOPT Version :9

Sequence 1:NP_728118.2 Gene:Gss2 / 318053 FlyBaseID:FBgn0052495 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_568495.2 Gene:GSH2 / 832797 AraportID:AT5G27380 Length:539 Species:Arabidopsis thaliana


Alignment Length:578 Identity:187/578 - (32%)
Similarity:297/578 - (51%) Gaps:112/578 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NTAVLRN-----CIR------------LPLAEDELLE-VTAKAKDYAIMHGAAMRSKTAFSPDS- 51
            |...|||     |.|            |...:||.:: :...|..::.:||..:..|:.....: 
plant    44 NPKTLRNQSPLRCGRSFKMESQKPIFDLEKLDDEFVQKLVYDALVWSSLHGLVVGDKSYQKSGNV 108

  Fly    52 ----LNFAPFVLVPSSFPRKEFEKAVALQPIINRLMHNVAHDEEFITTTLAETIKVDEFTANLFN 112
                |..||..|:|::||...:::|..:.|:.|.|:..|:.|.:|:..:|:.|.|||.||:.|.:
plant   109 PGVGLMHAPIALLPTAFPEAYWKQACNVTPLFNELIDRVSLDGKFLQDSLSRTKKVDVFTSRLLD 173

  Fly   113 IYRKVLAHGFTQKTSLGMLRSDLMLESGCPELSPRALRTAAGEDRGQDAGAAVGQIAGANGAAGV 177
            |:.|:|.....:...||:.|.|.||                                        
plant   174 IHSKMLERNKKEDIRLGLHRFDYML---------------------------------------- 198

  Fly   178 GTAAGTGSKEEEHREVQLSRVTKEPERRATGAQSAYCCWKQVEINTIASGFGHLGPASKTIQRFV 242
                     :||...:                       .|:|:|||:..|..|......:.:.:
plant   199 ---------DEETNSL-----------------------LQIEMNTISCSFPGLSRLVSQLHQSL 231

  Fly   243 LSELGHADKL----HNMPDNNALAGLCDGMVKAWDIYAKPQAVILFIIEDVSYNICDQRFHEFYI 303
            |...|  |::    ..:|.|.:.....|.:.|||..|:.|:||::.|::....|:.||......:
plant   232 LRSYG--DQIGIDSERVPINTSTIQFADALAKAWLEYSNPRAVVMVIVQPEERNMYDQHLLSSIL 294

  Fly   304 RETYPHIKVLRRTLTEVHREGKLGQSKELLLGSQEVAVIYFRAGYEPGHYHSQADWDARYLMETS 368
            ||.: :|.|:|:||.||.:||.:.:.:.|::|.|.|||:|||:||.|..:.|:::|:||.|:|.|
plant   295 REKH-NIVVIRKTLAEVEKEGSVQEDETLIVGGQAVAVVYFRSGYTPNDHPSESEWNARLLIEES 358

  Fly   369 LAIKCPSIHYHLAGTKKVQQALAQPAVLERFINDPEEIKAVGKIFTGLYSLDDNEAGNASYEMAL 433
            .|:|||||.|||.|:||:||.||:|.|||||:::.|:|..:.|.|.||:||||:|.    .:.|:
plant   359 SAVKCPSIAYHLTGSKKIQQELAKPGVLERFLDNKEDIAKLRKCFAGLWSLDDSEI----VKQAI 419

  Fly   434 RTPERFVLKPQREGGGNNVYGVDIPDALKRMSR---VERSAWILMDLIHPPLTKGYMVRPGGDMP 495
            ..|..||:||||||||||:||.|:.:.|.|:.:   ...:|:|||..|.|.::..::||.|....
plant   420 EKPGLFVMKPQREGGGNNIYGDDVRENLLRLQKEGEEGNAAYILMQRIFPKVSNMFLVREGVYHK 484

  Fly   496 PQIVDMVSELGIFGVVIGDAEHIVHNYQAGHMLRTKLSTANEGGVAAGLGALDSPYLI 553
            .|   .:||||::|..:...:.::.|.|:|:::|||:::::|||||||.|.|||.|||
plant   485 HQ---AISELGVYGAYLRSKDEVIVNEQSGYLMRTKIASSDEGGVAAGFGVLDSIYLI 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gss2NP_728118.2 GSH_synth_ATP 20..552 CDD:281854 177/544 (33%)
GSH2NP_568495.2 PLN02977 65..539 CDD:215528 179/555 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 264 1.000 Domainoid score I466
eggNOG 1 0.900 - - E1_KOG0021
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H148
Inparanoid 1 1.050 326 1.000 Inparanoid score I690
OMA 1 1.010 - - QHG54115
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005180
OrthoInspector 1 1.000 - - oto3243
orthoMCL 1 0.900 - - OOG6_101596
Panther 1 1.100 - - LDO PTHR11130
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3696
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.830

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