DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gss2 and gsa1

DIOPT Version :9

Sequence 1:NP_728118.2 Gene:Gss2 / 318053 FlyBaseID:FBgn0052495 Length:562 Species:Drosophila melanogaster
Sequence 2:NP_001342812.1 Gene:gsa1 / 2542896 PomBaseID:SPAC3F10.04 Length:498 Species:Schizosaccharomyces pombe


Alignment Length:573 Identity:179/573 - (31%)
Similarity:264/573 - (46%) Gaps:132/573 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 DELLEVTAKAKDYAIMHGAAMRSKTAFSPDSLNFA---PFVLVPSSFPRKEFEKAVALQPIINRL 82
            :::.|:...|:|:|..||... ::.:.|.:..|.|   |..|.||..|...|.:||::|...|:|
pombe     9 EQIEELGKGARDFAFAHGVVF-TELSVSKEGRNIATQIPITLFPSVIPHGAFVEAVSVQKAYNKL 72

  Fly    83 MHNVAHDEEFITTTLAETIKVDEFTANLFNIY---RKVLAH---GFTQKTSLGMLRSDLMLES-- 139
            ...:|:|.||:...|....|.|||...|:|:|   |:.:||   ...|..|||:.|||.|:..  
pombe    73 YAKIANDYEFLRLHLQSITKYDEFMNKLWNLYQKHREAVAHLKENQFQPLSLGVFRSDYMVHQDD 137

  Fly   140 ---GCPELSPRALRTAAGEDRGQDAGAAVGQIAGANGAAGVGTAAGTGSKEEEHREVQLSRVTKE 201
               ||                                                            
pombe   138 SFIGC------------------------------------------------------------ 142

  Fly   202 PERRATGAQSAYCCWKQVEINTIASGFGHLGPASKTIQRFVLSELGHADKLHNMP-------DNN 259
                           ||||.|||:..||.:..|...:..: .|:.|    |:..|       .|.
pombe   143 ---------------KQVEFNTISVSFGGVSKAVSNLHAY-CSQSG----LYRKPLTTNYLTVNT 187

  Fly   260 ALAGLCDGMVKAWDIY-----------------AKPQAVILFIIEDVSYNICDQRFHEFYIRETY 307
            :::|:|.|:..|.|.|                 .||  ::||:::....||.|||..|:.:...:
pombe   188 SVSGICTGISNAVDAYRDYVKNITSKMNIASDNTKP--IVLFVVKGGERNITDQRTLEYELLNRF 250

  Fly   308 PHIKVLRRTLTE----VHREGKLGQSKELLLGSQEVAVIYFRAGYEPGHYHSQADWDARYLMETS 368
             |:...|..:.|    :|.:.......:....:.||||:|:|.||....|.||..||.|..:|.:
pombe   251 -HVISKRIDIAELNSLIHDKSSNKLYMKTSFTTYEVAVVYYRVGYALDDYPSQEAWDMRLTIENT 314

  Fly   369 LAIKCPSIHYHLAGTKKVQQALAQPAVLERFINDPEEIKAVGKIFTGLYSLDDNEAGNASYEMAL 433
            ||||||||..||||:||:||.||:...||||: :.:|::||...|..:|.|||...|....::|.
pombe   315 LAIKCPSISTHLAGSKKIQQVLAESNALERFL-EGDELQAVRSTFADMYPLDDTPRGKEGIKLAF 378

  Fly   434 RTPERFVLKPQREGGGNNVYGVDIPDALKRMSRVERSAWILMDLIHPPLTKGYMVRPGGDMPPQI 498
            ..||.|||||||||||||.||.|||..|.:|.:.|..::|||..|:...::.|:::  |:.|.:.
pombe   379 EKPEDFVLKPQREGGGNNTYGKDIPGLLSKMPQEEWDSYILMRYINAVPSQNYILK--GERPEKF 441

  Fly   499 VDMVSELGIFGVVIGD--AEHIVHNYQAGHMLRTKLSTANEGGVAAGLGALDS 549
             |:|.|:||.|.::.:  .:.:|.|.|:|.:.|||....||||||.|..:|.|
pombe   442 -DVVDEIGILGTIVWNIKTDEVVQNGQSGFICRTKPKKTNEGGVATGYASLSS 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gss2NP_728118.2 GSH_synth_ATP 20..552 CDD:281854 179/573 (31%)
gsa1NP_001342812.1 glut_syn_euk 11..496 CDD:273912 179/571 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 211 1.000 Domainoid score I602
eggNOG 1 0.900 - - E1_KOG0021
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H148
Inparanoid 1 1.050 211 1.000 Inparanoid score I951
OMA 1 1.010 - - QHG54115
OrthoFinder 1 1.000 - - FOG0005180
OrthoInspector 1 1.000 - - oto100523
orthoMCL 1 0.900 - - OOG6_101596
Panther 1 1.100 - - LDO PTHR11130
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R528
SonicParanoid 1 1.000 - - X3696
TreeFam 1 0.960 - -
1413.860

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