DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl14 and Pdfr

DIOPT Version :9

Sequence 1:NP_728509.1 Gene:mthl14 / 318046 FlyBaseID:FBgn0052476 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster


Alignment Length:607 Identity:99/607 - (16%)
Similarity:177/607 - (29%) Gaps:251/607 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 FNASAQISTVNNSSKGSNNSNIFHEDTFNSTSIDVLDASIHSTLVVPQTYSTEAATISGARFATS 83
            |.:.:.:...::.|..:....:.|:          .||   ||...|.||     .:.|......
  Fly   110 FESKSMLEPTSSHSLATGRVPLLHD----------FDA---STTESPGTY-----VLDGVARVAQ 156

  Fly    84 VPVQSPVDNPLDPADCSQ-------REKYRKQPVATPSSRLRKCCPHGENLNIYRENQSDSMCD- 140
            :.::..|.:.|..:|..|       ...:.....:..::....|.....|   |...|:...|: 
  Fly   157 LALEPTVMDALPDSDTEQVLGNLNSSAPWNLTLASAAATNFENCSALFVN---YTLPQTGLYCNW 218

  Fly   141 --NGLLSFEPTIISAVLFDNC-------------IEDLEVETT---------------LDYDIGN 175
              :.||.:.||....:...||             |...|::..               .||   .
  Fly   219 TWDTLLCWPPTPAGVLARMNCPGGFHGVDTRKFAIRKCELDGRWGSRPNATEVNPPGWTDY---G 280

  Fly   176 PCNSSLLYDDKDDVFFVLQDGSLLIIDKFGNESYTVKEHYCLDIDKSGHLFAFTCVTQVEEQIAF 240
            ||.       |.::..::|        :.|::.:   :.| :||.:.         |:..|.:..
  Fly   281 PCY-------KPEIIRLMQ--------QMGSKDF---DAY-IDIARR---------TRTLEIVGL 317

  Fly   241 AKVVFVAVLMLISMPCLLLVSYLHMTLRLLRN----LH--------------------------- 274
            ...:|..::.|:          :..|.|.|||    :|                           
  Fly   318 CLSLFALIVSLL----------IFCTFRSLRNNRTKIHKNLFVAMVLQVIIRLTLYLDQFRRGNK 372

  Fly   275 ----GLSLSLMS----LCLAS------------------GYFVHSVVHIYGIPNQGFIGYVIQFC 313
                ..|||::.    ||.||                  |.::|::|.:          .|.|..
  Fly   373 EAATNTSLSVIENTPYLCEASYVLLEYARTAMFMWMFIEGLYLHNMVTV----------AVFQGS 427

  Fly   314 ILSYFFWYLCICFNVLL-NVWYKLPCCI--------QCSKSWATFNFACYAVFAFSGPATIVALT 369
            ....||..|..|..:|: .||.:  |.:        :|  .| .:|...| .:...||...|.| 
  Fly   428 FPLKFFSRLGWCVPILMTTVWAR--CTVMYMDTSLGEC--LW-NYNLTPY-YWILEGPRLAVIL- 485

  Fly   370 VQKGLPGMPSYFLQGLTESIRDSQRYFIPPVSTILFLSFLLNIISFFGFQRISGYAKAEKNIQER 434
                                              |...||:|||.....:               
  Fly   486 ----------------------------------LNFCFLVNIIRVLVMK--------------- 501

  Fly   435 KCLFDQQKYEDVKKDAKCV-------SLLGIIMVVSWLLEIITFYSGSNSNYLIL---CDMVNGL 489
               ..|.:..|:::..|.|       .||||..::..|..:.|     .:|:.:.   ...:...
  Fly   502 ---LRQSQASDIEQTRKAVRAAIVLLPLLGITNLLHQLAPLKT-----ATNFAVWSYGTHFLTSF 558

  Fly   490 QGVWVLLIFLVVRRR-RTIILR 510
            ||.::.||:..:... |.::|:
  Fly   559 QGFFIALIYCFLNGEVRAVLLK 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl14NP_728509.1 7tmB3_Methuselah-like 239..512 CDD:320167 59/349 (17%)
TM helix 1 241..266 CDD:320167 2/24 (8%)
TM helix 2 275..297 CDD:320167 10/43 (23%)
TM helix 3 306..331 CDD:320167 7/25 (28%)
TM helix 4 349..369 CDD:320167 5/19 (26%)
TM helix 5 389..418 CDD:320167 6/28 (21%)
TM helix 6 445..472 CDD:320167 9/33 (27%)
TM helix 7 477..502 CDD:320167 5/27 (19%)
PdfrNP_001245501.1 HRM 213..272 CDD:280888 9/58 (16%)
7tm_4 306..563 CDD:304433 57/349 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462171
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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