DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl14 and mth-1

DIOPT Version :10

Sequence 1:NP_728509.1 Gene:mthl14 / 318046 FlyBaseID:FBgn0052476 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001364699.1 Gene:mth-1 / 185152 WormBaseID:WBGene00017948 Length:1757 Species:Caenorhabditis elegans


Alignment Length:589 Identity:108/589 - (18%)
Similarity:196/589 - (33%) Gaps:197/589 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SSKGSNNSNIF-----HEDTFNSTSIDVLDASIHSTLVVPQTY-----STE---------AATIS 76
            |..|...|::|     |:..|:.                ||.|     |:|         |...:
 Worm  1270 SGSGEQVSHVFFTIYRHQKLFSG----------------PQKYRNYGSSSEEDDEEEDDPAMEEA 1318

  Fly    77 GARFATSVPVQSPVDNPLD-------PADCSQREKYRKQPVATP-----------------SSRL 117
            |||:.     :...:|..|       |:.||::...   |..||                 .|:|
 Worm  1319 GARYK-----RDTGNNNTDDIGQIPAPSKCSEQISI---PFGTPVLSASIIGGDQGAFISRMSKL 1375

  Fly   118 RKCCPHGENLNIYRENQSDSMCDNGLLSFEPTIISAVLFDNCIEDLEVETTLDYDIGN------P 176
            ....|....|.......|..:..|.::|:         |:...::.|::...|.::|:      .
 Worm  1376 VGAAPVMAKLQFNVGQMSRPLHGNTIVSW---------FNTGTQEWELQQKCDTEVGSDGIVTAS 1431

  Fly   177 CNSSLLYDDKDDVFFVLQDGSLLIIDKFGNESYTVKEHYCLDIDKSGHLFAFTC---VTQVEEQI 238
            |..             |.|.|:|:..:...|                    :.|   :|.:...:
 Worm  1432 CEH-------------LTDFSVLVYSQPNAE--------------------YVCSMPLTIIGYSV 1463

  Fly   239 AFAKVVFVAVLMLISMPCLLLVSYLHMTLRLLRNLHGLSLSLMSLCLASGYFVHSVVHIYGIPNQ 303
            ..|.:|.:.:|:||.:...:....:...|..:|.....:..:::|.....:|:..::.::.:...
 Worm  1464 NGASIVCLLLLILIGLMFYIRGELVRRVLIYIRGQAPTTGDVVNLAYYCVFFLFFILSLFFMDQS 1528

  Fly   304 G----FIG---YVIQFCILSYFFWYLCICFNVLLNVWYKLPCCIQCSK----------SWATFNF 351
            |    .:|   |.:....:|||.....|..::|:.:  ::.|.....|          ..|..:.
 Worm  1529 GGDDRSMGTSTYCVVIAAMSYFSLISAIMMSMLIGL--RMVCHFFSPKLRLFFGVMTSPPAALSI 1591

  Fly   352 ACYAVFAFSGPATIVALT-------------VQKGLPGMPSYFLQGLTESIRDSQRYFIPPVSTI 403
            .....|.|:   .|:||.             |:      |.|.:..:...:      .:|.::.:
 Worm  1592 GLIVPFTFT---LILALVDTSFFKRDDCFCWVR------PDYIVYAVVIPV------VLPIINGV 1641

  Fly   404 LFLSFLLNIISFFGFQRISGYAKAEKNIQERKCLFDQQKYEDVKKDAKCVSLLGIIMVVS----W 464
            :..||.  |...| ||...|.|..|.:            :.|.:..:|.:.|  |||.|:    |
 Worm  1642 ICSSFA--IYKMF-FQAKRGLASKETS------------HYDAEFWSKVMGL--IIMQVAMGLPW 1689

  Fly   465 LLEIITFYSGSNS--NYLILCDMVNGLQGVWVLLIFLVVRRR-RTIILRW------WYDRGSHEI 520
            .:|.|.......|  ||:.:  ::.|.||:.:.||||..|:| |....:|      |..:.|...
 Worm  1690 GIEFILIGVAGPSPWNYIFV--LLLGTQGIDLFLIFLYRRQRLRNESRKWSSREEKWETKRSRAA 1752

  Fly   521 EGTE 524
            |..|
 Worm  1753 EADE 1756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl14NP_728509.1 7tmB3_Methuselah-like 239..512 CDD:410632 62/315 (20%)
TM helix 1 241..266 CDD:410632 5/24 (21%)
TM helix 2 275..297 CDD:410632 2/21 (10%)
TM helix 3 306..331 CDD:410632 7/27 (26%)
TM helix 4 349..369 CDD:410632 4/19 (21%)
TM helix 5 389..418 CDD:410632 5/28 (18%)
TM helix 6 445..472 CDD:410632 10/30 (33%)
TM helix 7 477..502 CDD:410632 10/26 (38%)
mth-1NP_001364699.1 GPS 1398..1447 CDD:470616 11/70 (16%)
7tm_GPCRs <1541..1733 CDD:475119 49/227 (22%)
TM helix 3 1542..1564 CDD:410628 5/21 (24%)
TM helix 4 1587..1603 CDD:410628 3/18 (17%)
TM helix 5 1623..1645 CDD:410628 2/27 (7%)
TM helix 6 1675..1697 CDD:410628 8/23 (35%)
TM helix 7 1702..1727 CDD:410628 10/26 (38%)

Return to query results.
Submit another query.