DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and ACA4

DIOPT Version :9

Sequence 1:NP_001259349.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_193831.1 Gene:ACA4 / 827846 AraportID:AT4G20990 Length:267 Species:Arabidopsis thaliana


Alignment Length:234 Identity:59/234 - (25%)
Similarity:96/234 - (41%) Gaps:59/234 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGA----LEQ 64
            ||||:::|..:..|.|   ..:...::| ..|.:.|.|...||::.         |.|    :.:
plant    65 QSPIDLTNERVSLIHD---QAWTRQYKP-APAVITNRGHDIMVSWK---------GDAGKMTIRK 116

  Fly    65 DMYVFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLAVVAFFIQAC 129
            ..:...|.|:|      |..|||:.|.:|.:|.|.||.:::            |...|...:...
plant   117 TDFNLVQCHWH------SPSEHTVNGTRYDLELHMVHTSAR------------GRTAVIGVLYKL 163

  Fly   130 GEKDCPEF-KKITEGIRIV--QKIHTSASLDSDCLSWIGLQEL---SKHYYTYKGSLTTAPYFES 188
            ||.:  || .|:..||:.|  ::|:         |..|..:|:   ::.:|.|.||||..|..|.
plant   164 GEPN--EFLTKLLNGIKAVGNKEIN---------LGMIDPREIRFQTRKFYRYIGSLTVPPCTEG 217

  Fly   189 VTWIIYRTPIYVSRGQVQVFR-------NLQSCPKDESK 220
            |.|.:.:....:|..|:...|       ...|.|..:||
plant   218 VIWTVVKRVNTISMEQITALRQAVDDGFETNSRPVQDSK 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_001259349.1 alpha_CA 4..233 CDD:238200 59/234 (25%)
ACA4NP_193831.1 PLN02179 1..226 CDD:177835 52/202 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 1.000 Domainoid score I2610
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 92 1.000 Inparanoid score I2251
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 1 1.000 - - mtm1014
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.920

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