DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and ca15b

DIOPT Version :9

Sequence 1:NP_001259349.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_005169499.1 Gene:ca15b / 791844 ZFINID:ZDB-GENE-040426-2222 Length:320 Species:Danio rerio


Alignment Length:240 Identity:72/240 - (30%)
Similarity:108/240 - (45%) Gaps:33/240 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            ||||.|....::...::....|.|:.:...:..::|||||..||...:|.:  :.||.| ...:.
Zfish    51 QSPINIVTANVKANANLTSFTYVGYNDSTALTVIKNTGTSIQVTLDPKKMR--VAGGNL-PGRFA 112

  Fly    69 FEQLHFHWSDCDE-SGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKP-----DGLAVVAFFIQ 127
            ..:.|.||.:... .|.|||:.|.::.||.|.|             |||     |.|||:..||:
Zfish   113 STEFHLHWGNGSAMPGSEHTVNGKRFPMELHIV-------------NKPVSNTSDSLAVLGVFIE 164

  Fly   128 ACGEKDCPE-FKKITEGIRIVQKIHTSASL-----DSDCLSWIGLQELSKHYYTYKGSLTTAPYF 186
            |..|...|| :|.:|..:..:.|....|||     ..|.||.:...:    ||.|.|||||....
Zfish   165 ASNETGKPESWKTLTSYLTRIVKAGDKASLFRNFSMDDLLSGVDRTK----YYRYLGSLTTPNCN 225

  Fly   187 ESVTWIIYRTPIYVSRGQVQVFRNLQSCPKDESKKIVNN-YREIQ 230
            |.|.|.:::.||.|||..:.:|..........:..::.| :|.:|
Zfish   226 EGVIWTVFKDPIRVSRDLIDLFSTTVYINNSSNSPLMTNIFRSVQ 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_001259349.1 alpha_CA 4..233 CDD:238200 72/240 (30%)
ca15bXP_005169499.1 alpha_CA_IV_XV_like 48..279 CDD:239391 72/240 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18952
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

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