DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and ca13.2

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001072785.1 Gene:ca13.2 / 780246 XenbaseID:XB-GENE-29208903 Length:258 Species:Xenopus tropicalis


Alignment Length:238 Identity:84/238 - (35%)
Similarity:119/238 - (50%) Gaps:27/238 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            ||||.|:.|..::...:.||::  .::|....|:.|.|....|.|.....:..:..|.|: ..|.
 Frog    16 QSPININTRTAKYNPSLKPLKF--SYDPKTAKRIVNVGHCFNVEFEDICDKSVLSEGPLD-GHYR 77

  Fly    69 FEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNS-KYKDFTEAKNKPDGLAVVAFFIQACGEK 132
            ..|.||||...|..|.||.::|..|..|.|.||:|| ||..|.||...|||:|||..|:: .|..
 Frog    78 LCQFHFHWGSSDRDGSEHNIDGHLYPAELHIVHWNSKKYTSFAEAAKHPDGVAVVGVFLK-LGNT 141

  Fly   133 DCPEFKKITEGIRIVQ---------KIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFES 188
            : |..:.|.|.:..|:         :.|.:..|..|.           :|:||.|||||.||||.
 Frog   142 N-PALQSIIENLDKVKTKGKACPFTEFHLNGLLPEDL-----------NYWTYMGSLTTKPYFEC 194

  Fly   189 VTWIIYRTPIYVSRGQVQVFRNLQSCPKDESKK-IVNNYREIQ 230
            |||||.:..|.||..|::.||.||...::|:.. |:.|:|.:|
 Frog   195 VTWIILQEAITVSSQQLEQFRRLQCTSENENPSFILENHRPVQ 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 84/238 (35%)
ca13.2NP_001072785.1 alpha_CA 16..247 CDD:469577 84/238 (35%)

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