DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and Car12

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_006511611.1 Gene:Car12 / 76459 MGIID:1923709 Length:355 Species:Mus musculus


Alignment Length:241 Identity:75/241 - (31%)
Similarity:125/241 - (51%) Gaps:26/241 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VQSPIEISNRAIEHIDDVDPLEYHGHWEPVGVAR---VQNTGTSAMVTFSKRKQQPYIIGGALEQ 64
            :||||::.:..:::...:.||::.|:  .|.|.:   :.|.|.|..:..:   ...||.|  |:.
Mouse    54 LQSPIDLHSDILQYDASLAPLQFQGY--NVSVEKLLNLTNDGHSVRLNLN---SDMYIQG--LQP 111

  Fly    65 DMYVFEQLHFHWSD-CDESGCEHTLEGMKYSMEAHAVHYNSK-YKDFTEAKNKPDGLAVVAFFIQ 127
            ..|..||||.||.: .|..|.|||:.|..::.|.|.|||||. |.||:.|.:|.:||||:|..|:
Mouse   112 HHYRAEQLHLHWGNRNDPHGSEHTVSGKHFAAELHIVHYNSDLYPDFSTASDKSEGLAVLAVLIE 176

  Fly   128 ACGEKDCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQEL----SKHYYTYKGSLTTAPYFES 188
             .|..: |.:.||...::     |.........:....::||    ...||.|:|||||.|.:.:
Mouse   177 -IGSAN-PSYDKIFSHLQ-----HVKYKGQQVLIPGFNIEELLPESPGEYYRYEGSLTTPPCYPT 234

  Fly   189 VTWIIYRTPIYVSRGQVQVFRN-LQSCPKDE--SKKIVNNYREIQR 231
            |.|.::|.|:.:|:.|:..... |.....|:  .::::||:|::|:
Mouse   235 VLWTVFRNPVQISQEQLLALETALYFTHMDDPTPREMINNFRQVQK 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 75/240 (31%)
Car12XP_006511611.1 alpha_CA 39..290 CDD:469577 75/241 (31%)

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