DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and CA1

DIOPT Version :9

Sequence 1:NP_001259349.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001122301.1 Gene:CA1 / 759 HGNCID:1368 Length:261 Species:Homo sapiens


Alignment Length:232 Identity:79/232 - (34%)
Similarity:116/232 - (50%) Gaps:15/232 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            |||::|.....:|...:.|:..  .:.|.....:.|.|.|..|.|.....:..:.||.. .|.|.
Human    29 QSPVDIKTSETKHDTSLKPISV--SYNPATAKEIINVGHSFHVNFEDNDNRSVLKGGPF-SDSYR 90

  Fly    69 FEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNS-KYKDFTEAKNKPDGLAVVAFFIQACGEK 132
            ..|.||||...:|.|.|||::|:|||.|.|..|:|| ||....||.:|.|||||:...::. ||.
Human    91 LFQFHFHWGSTNEHGSEHTVDGVKYSAELHVAHWNSAKYSSLAEAASKADGLAVIGVLMKV-GEA 154

  Fly   133 DCPEFKKITEGIRIVQ---KIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVTWIIY 194
            : |:.:|:.:.::.::   |.....:.|...     |...|..::||.||||..|.:|||||||.
Human   155 N-PKLQKVLDALQAIKTKGKRAPFTNFDPST-----LLPSSLDFWTYPGSLTHPPLYESVTWIIC 213

  Fly   195 RTPIYVSRGQVQVFRNLQS-CPKDESKKIVNNYREIQ 230
            :..|.||..|:..||:|.| ...|.:..:.:|.|..|
Human   214 KESISVSSEQLAQFRSLLSNVEGDNAVPMQHNNRPTQ 250

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_001259349.1 alpha_CA 4..233 CDD:238200 79/232 (34%)
CA1NP_001122301.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 1/1 (100%)
alpha_CA 2..261 CDD:412109 79/232 (34%)