DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and Car10

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_082572.1 Gene:Car10 / 72605 MGIID:1919855 Length:328 Species:Mus musculus


Alignment Length:232 Identity:65/232 - (28%)
Similarity:109/232 - (46%) Gaps:12/232 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            |||:.|....:.....:.||..:.....|. ..:.|||....:...| :....|.||.:... :.
Mouse    66 QSPVNIETSHMIFDPFLTPLRINTGGRKVS-GTMYNTGRHVSLRLDK-EHLVNISGGPMTYS-HR 127

  Fly    69 FEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSK-YKDFTEAKNKPDGLAVVAFFIQACGEK 132
            .|::..|:...|..|.||.|.|..:|.|...:|||.: |.:.|||...|:||.||:.||:. .:.
Mouse   128 LEEIRLHFGSEDSQGSEHLLNGQAFSGEVQLIHYNHELYTNVTEAAKSPNGLVVVSIFIKV-SDS 191

  Fly   133 DCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQEL---SKHYYTYKGSLTTAPYFESVTWIIY 194
            ..|...::.....|.:..:.:   |:..|..:.::||   :..:.||.||:|..|.:|:.:|||.
Mouse   192 SNPFLNRMLNRDTITRITYKN---DAYLLQGLNIEELYPETSSFITYDGSMTIPPCYETASWIIM 253

  Fly   195 RTPIYVSRGQVQVFRNL-QSCPKDESKKIVNNYREIQ 230
            ..|:|::|.|:...|.| |:.|......:.:|:|.:|
Mouse   254 NKPVYITRMQMHSLRLLSQNQPSQIFLSMSDNFRPVQ 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 65/232 (28%)
Car10NP_082572.1 alpha_CARP_X_XI_like 46..302 CDD:239395 65/232 (28%)

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