DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and car15

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001038604.2 Gene:car15 / 568143 ZFINID:ZDB-GENE-091204-152 Length:312 Species:Danio rerio


Alignment Length:261 Identity:74/261 - (28%)
Similarity:119/261 - (45%) Gaps:29/261 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SPIEISNRAIEHIDDVDPLEYHGH--------WEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGA 61
            |||.:.:..::: ..:|.|:.||.        |       :.|.|.|.::......|   :.||.
Zfish    50 SPINLDHHLMKN-HSLDSLQLHGFNLTHKGQWW-------LTNQGHSVVLEVGDGMQ---VSGGG 103

  Fly    62 LEQDMYVFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLAVVAFFI 126
            |......| ||||||.....:|.||||:.:::.||.|.|:..|.:.:.|.|...|.|:||:..|:
Zfish   104 LPATYRTF-QLHFHWGSVSSNGSEHTLDHLRFPMEMHIVNIKSTHPNLTSALEDPTGIAVLGVFV 167

  Fly   127 QACGEKDCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVTW 191
            ......: ..|:.|:..:..|.....:.|:....|..:..|.....||.|.|||||.|..|.|.|
Zfish   168 DVTYLHN-ENFQSISSALSYVAYKGQTKSIKPFPLVNLLPQNNLTQYYRYHGSLTTPPCSEVVLW 231

  Fly   192 IIYRTPIYVSRGQVQVFRNLQSCPKDESK---KIVNNYREIQRPHKDPEIFFARN----TNPKSK 249
            .||..|:|:|..|.:.|.:.....::|::   .:.:|||.|...:..| ::.:::    ||..|.
Zfish   232 TIYEVPVYISWAQFEQFVSGIYSTEEEAEIQALLHDNYRHIHPTYSRP-VYASKDAKLLTNGVSS 295

  Fly   250 L 250
            |
Zfish   296 L 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 69/238 (29%)
car15NP_001038604.2 None

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