DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and ca14

DIOPT Version :9

Sequence 1:NP_001259349.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001315073.1 Gene:ca14 / 567897 ZFINID:ZDB-GENE-051030-57 Length:373 Species:Danio rerio


Alignment Length:238 Identity:69/238 - (28%)
Similarity:112/238 - (47%) Gaps:23/238 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVAR----VQNTGTSAMVTFSKRKQQPYIIG-GALE 63
            |||:.:......|...:.|::..|:.:|   .|    :.|.|.:..:|.      |:.:| |.|.
Zfish    49 QSPVNVDTSQTLHDPTLIPVQPMGYNQP---GRRPFILSNNGHTVQMTL------PHWMGVGGLP 104

  Fly    64 QDMYVFEQLHFHWSD--CDESGCEHTLEGMKYSMEAHAVHYNSK-YKDFTEAKNKPDGLAVVAFF 125
            .. |...|||.||.:  ...:|.|||:.|...|.|.|.||||:: |.:.:||..:.:||||:...
Zfish   105 SH-YSAVQLHLHWGNGVGIATGSEHTINGQSTSAELHIVHYNTEVYANLSEAMMQKNGLAVLGIL 168

  Fly   126 IQACGEKDCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVT 190
            |:. ||:....:..|...:..::......::.|..|..:..:.||: |:.|.|||||.|..|||.
Zfish   169 IET-GEEVNQAYGSIFNYLGRIRYAGQKVAIPSFDLQSLLPENLSQ-YFRYNGSLTTPPCHESVL 231

  Fly   191 WIIYRTPIYVSRGQVQVFRNLQSCPKDESKK---IVNNYREIQ 230
            |.|:...:.:|..|:.....:....|.|.::   :.:|||..|
Zfish   232 WTIFNERVKISHSQLLKLETVLYSSKAEEEEPTILQDNYRATQ 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_001259349.1 alpha_CA 4..233 CDD:238200 69/238 (29%)
ca14NP_001315073.1 alpha_CA 33..285 CDD:294017 69/238 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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