DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and ca7

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_957107.1 Gene:ca7 / 564201 ZFINID:ZDB-GENE-040426-1786 Length:263 Species:Danio rerio


Alignment Length:242 Identity:84/242 - (34%)
Similarity:121/242 - (50%) Gaps:34/242 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLE--YHGHWEPVGVA-------RVQNTGTSAMVTFSKRKQQPYIIG 59
            ||||           |:.|.|  :.....|:.::       .:.|.|.|.:|.|....::..|.|
Zfish    29 QSPI-----------DIVPSEAVFDSKLSPISLSYNNCTSLSISNNGHSVVVEFVDTDERSVITG 82

  Fly    60 GALEQDMYVFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYN-SKYKDFTEAKNKPDGLAVVA 123
            |.|| :||..:|.||||......|.|||:.|..:..|.|.||:| :|||.|:||...||||||:.
Zfish    83 GPLE-NMYRLKQFHFHWGSKGCCGSEHTVAGKTFVSELHLVHWNANKYKSFSEAAAAPDGLAVLG 146

  Fly   124 FFIQACGEKDCPEFKKITEGIRIVQ---KIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPY 185
            .|::...|...  ..:||:.:.:|:   .:......:..||....|:     |:||.|||||.|.
Zfish   147 IFLETGDEHRA--LHQITDALYMVRFKGSLAEFKGFNPKCLLPNSLE-----YWTYPGSLTTPPL 204

  Fly   186 FESVTWIIYRTPIYVSRGQVQVFRNL--QSCPKDESKKIVNNYREIQ 230
            :||||||:.:.|||||..|:..||.|  ....:::..::.||||..|
Zfish   205 YESVTWIVLKEPIYVSEKQMGKFRTLLFNGEEEEDRNRMENNYRPPQ 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 84/242 (35%)
ca7NP_957107.1 alpha_CA_VII 26..262 CDD:239402 84/242 (35%)

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