DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and ca15a

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001075158.1 Gene:ca15a / 553469 ZFINID:ZDB-GENE-070424-7 Length:324 Species:Danio rerio


Alignment Length:240 Identity:70/240 - (29%)
Similarity:110/240 - (45%) Gaps:21/240 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            ||||.|....:....::....:.|.........:.|:|.|.:||..:....  :.||.| ..:||
Zfish    51 QSPINIVTAQVLENSNLTQFNFTGFDANTTFISMANSGISVVVTLDEEIMS--VQGGDL-PGLYV 112

  Fly    69 FEQLHFHWSDCDE-SGCEHTLEGMKYSMEAHAVHYNSKYKDFTE---AKNKPDGLAVVAFFIQAC 129
            .:|.|.||.:... .|.|||::|.:|:||.|.|:.:|||.....   |.|....|||:.|||:..
Zfish   113 SKQFHLHWGNSSSFPGSEHTVDGKQYAMELHIVNVHSKYNGSLSAALAANDSSALAVLGFFIEGT 177

  Fly   130 GEKDCPEFKKITEGI--RIVQKIHTSASLDSDCLSWIGLQEL-----SKHYYTYKGSLTTAPYFE 187
            .|..    |....|:  ..::.|..|.:...|.::...:..|     ...||.|:|||||....|
Zfish   178 NEAS----KAKGWGVLTSFLRNITYSGNATVDIMNRTSMNSLLEGVNKTKYYRYRGSLTTPSCNE 238

  Fly   188 SVTWIIYRTPIYVSRGQVQVFRNLQSCPKDESKKI--VNNYREIQ 230
            :|.|.:::.||.|:...:.:| :.....|:.|..:  |||:|.:|
Zfish   239 AVIWTVFKEPIKVNNNLINLF-STTVFAKNASAPVLNVNNFRGVQ 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 70/240 (29%)
ca15aNP_001075158.1 alpha_CA_IV_XV_like 48..291 CDD:239391 70/240 (29%)

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