DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and ca2

DIOPT Version :9

Sequence 1:NP_001259349.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001015729.1 Gene:ca2 / 548446 XenbaseID:XB-GENE-484348 Length:260 Species:Xenopus tropicalis


Alignment Length:229 Identity:77/229 - (33%)
Similarity:117/229 - (51%) Gaps:10/229 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            ||||.|.:...::...:.|:..  .::|.....:.|.|.:..|.|...:.:..:.|||:... |.
 Frog    28 QSPINIVSAEAKYDHHLKPISI--KYDPSTAKVILNNGHAFNVEFDDSEDKSVLSGGAVSHP-YR 89

  Fly    69 FEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLAVVAFFIQACGEKD 133
            .:|.||||..||..|.|||::|:||..|.|.||:|:||....||....||||||..|::. ||..
 Frog    90 LKQFHFHWGSCDGHGSEHTVDGVKYEAELHLVHWNTKYASMAEAVKHCDGLAVVGVFLKV-GEAH 153

  Fly   134 CPEFKKITEGIRIV-QKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVTWIIYRTP 197
             |..:|:.:.:::: .|.:.:...|.|...   |...|..::.|||||||.|..:.|.|.:.|.|
 Frog   154 -PGLQKVLDALKLIPNKGNEAPFTDYDPSV---LLPNSLDFWNYKGSLTTPPLLQCVLWHVLREP 214

  Fly   198 IYVSRGQVQVFRNL-QSCPKDESKKIVNNYREIQ 230
            |.||..|:...|:| .:...|....:|:|:|..|
 Frog   215 IAVSNQQLSQLRSLFFNAEGDTPCCMVDNFRPPQ 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_001259349.1 alpha_CA 4..233 CDD:238200 77/229 (34%)
ca2NP_001015729.1 alpha_CA 1..259 CDD:381753 77/229 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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