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Protein Alignment CAH3 and CA13

DIOPT Version :9

Sequence 1:	NP_001259349.1	Gene:	CAH3 / 31804	FlyBaseID:	FBgn0030056	Length:	250	Species:	Drosophila melanogaster
Sequence 2:	NP_940986.1	Gene:	CA13 / 377677	HGNCID:	14914	Length:	262	Species:	Homo sapiens

Alignment Length:	230	Identity:	85/230 - (36%)
Similarity:	127/230 - (55%)	Gaps:	11/230 - (4%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            ||||||..:.:::...:.||..  .::|.....:.|:|.|..|.|...:.:..:.||.| ...|.
Human    29 QSPIEIKTKEVKYDSSLRPLSI--KYDPSSAKIISNSGHSFNVDFDDTENKSVLRGGPL-TGSYR 90

  Fly    69 FEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNS-KYKDFTEAKNKPDGLAVVAFFIQACGEK 132
            ..|:|.||...|:.|.||.::|:.|:.|.|.||:|| ||..|.||.::||||||:..|:| .||.
Human    91 LRQVHLHWGSADDHGSEHIVDGVSYAAELHVVHWNSDKYPSFVEAAHEPDGLAVLGVFLQ-IGEP 154

  Fly   133 DCPEFKKITEGI-RIVQKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVTWIIYRT 196
            : .:.:|||:.: .|.:|...:...:.|.||   |...|..|:||.||||..|..||||||:.:.
Human   155 N-SQLQKITDTLDSIKEKGKQTRFTNFDLLS---LLPPSWDYWTYPGSLTVPPLLESVTWIVLKQ 215

  Fly   197 PIYVSRGQVQVFRNLQSCPKDESKK-IVNNYREIQ 230
            ||.:|..|:..||:|....:.|:.. :|:|:|..|
Human   216 PINISSQQLAKFRSLLCTAEGEAAAFLVSNHRPPQ 250

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.