DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and CAH14

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_611519.2 Gene:CAH14 / 37359 FlyBaseID:FBgn0034554 Length:295 Species:Drosophila melanogaster


Alignment Length:213 Identity:42/213 - (19%)
Similarity:77/213 - (36%) Gaps:32/213 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 HWE-----PVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYVFEQLHFHWSDCDESGCEHT 87
            ||.     |:......|..|..|..::.....|.:.|..| ...|.|.:..|.|.....   ||:
  Fly    93 HWTYYEDLPMATVLENNGNTVIMRIYTANNFMPQLSGAEL-LGRYQFVEAIFKWGSLKS---EHS 153

  Fly    88 LEGMKYSMEAHAVH----YNSKYKDFTEAKNKPDGLAVVAFFIQACGEKDCPEFKKITEGIRIVQ 148
            :....:.:|..|:|    .|:.::..|.:            ::.|.........|::|:.::.:.
  Fly   154 IGKHNFCLELQALHRCAQLNNNFEYLTLS------------YLFALSHVKNEHLKQVTDHLKWIS 206

  Fly   149 KIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVTWIIYRTPIYVSRGQVQVFRNL-- 211
            :..:|..|....|..: ||.....|::|:|:..........||:|.|....|...|:..|..|  
  Fly   207 QPGSSIELPPFHLESL-LQPFGSGYFSYEGTYDNGDVVLPTTWLINRKISVVDSRQLSEFEALYG 270

  Fly   212 ----QSCPKDESKKIVNN 225
                ::|.....|:.:.|
  Fly   271 RNGNRNCKNGREKQPLGN 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 42/213 (20%)
CAH14NP_611519.2 alpha_CARP_receptor_like 69..293 CDD:239396 42/213 (20%)

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