Protein Alignment CAH3 and CARPA

DIOPT Version :10

• Sequence 1: NP_572497.1
• Gene: CAH3 / 31804
• FlyBaseID: FBgn0030056
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_572407.3
• Gene: CARPA / 31687
• FlyBaseID: FBgn0029962
• Length: 333
• Species: Drosophila melanogaster
• Alignment Length: 257
• Identity: 74/257 - (28%)
• Similarity: 116/257 - (45%)
• Gaps: 31/257 - (12%)

  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVAR------VQNTGTSAMVTFSK-RKQQPYIIGGA 61
            ||||::.         .|.|.:..:..|:.:.:      :.|||.|.:....| .||...|.||.
  Fly    66 QSPIDVV---------PDKLLFDPYLRPLHIDKHKVSGTLHNTGQSLVFRVDKDTKQHVNISGGP 121

  Fly    62 LEQDMYVFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSK-YKDFTEAKNKPDGLAVVAFF 125
            |.. .|.||:::.|:...:..|.||.::|..:..|.....:|.: |.:.:||::|..|:..::..
  Fly   122 LAY-RYQFEEIYIHYGTENVRGSEHFIQGYSFPGEIQIYGFNKELYHNMSEAQHKSQGIVGLSLM 185

  Fly   126 IQACGEKDCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVT 190
            :| .||...||.:.||.....|  ::...|.....:|...|...:.||.||:||.|....:||..
  Fly   186 VQ-IGETPNPELRIITSTFNKV--LYRGFSTPIRHISVRSLLPNTDHYITYEGSTTHPGCWESTV 247

  Fly   191 WIIYRTPIYVSRGQVQVFRNL----QSCPKDESKKIVNNYREIQRPHK---DPEIFFARNTN 245
            |||...|||:::.::...|.|    :|.||   ..:.||.|.:|..|.   ...|.|.||.|
  Fly   248 WIIVNKPIYITKQELYQLRRLMQGSESTPK---APLGNNARPVQSLHHRTVRTNIDFKRNKN 306

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CAH3	NP_572497.1	alpha_CA	4..233	CDD:238200	68/240 (28%)
CARPA	NP_572407.3	alpha_CARP_X_XI_like	46..300	CDD:239395	69/249 (28%)