DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and Car9

DIOPT Version :9

Sequence 1:NP_001259349.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_647466.2 Gene:Car9 / 230099 MGIID:2447188 Length:437 Species:Mus musculus


Alignment Length:236 Identity:70/236 - (29%)
Similarity:111/236 - (47%) Gaps:26/236 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGH-WEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMY 67
            |||::|..........:.|||..|: .:|:....:.|.|.:..:|.....:.  .:|...|   |
Mouse   140 QSPVDIRLERTAFCRTLQPLELLGYELQPLPELSLSNNGHTVQLTLPPGLKM--ALGPGQE---Y 199

  Fly    68 VFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLAVVAFFIQACGEK 132
            ...|||.||...|..|.|||:.|.::..|.|.||.::.:.:..||..:|.||||:|.|:|...|:
Mouse   200 RALQLHLHWGTSDHPGSEHTVNGHRFPAEIHVVHLSTAFSELHEALGRPGGLAVLAAFLQESPEE 264

  Fly   133 D------CPEFKKIT-EGIRI-VQKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESV 189
            :      ....::|: ||.:| :..:..||.|.||         ||: ||.|:|||||.|..:.|
Mouse   265 NSAYEQLLSHLEEISEEGSKIEIPGLDVSALLPSD---------LSR-YYRYEGSLTTPPCSQGV 319

  Fly   190 TWIIYRTPIYVSRGQVQVFRNLQSCPKDESKKIVNNYREIQ 230
            .|.::...:.:|..|:.........|:|...::  |:|..|
Mouse   320 IWTVFNETVKLSAKQLHTLSVSLWGPRDSRLQL--NFRATQ 358

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_001259349.1 alpha_CA 4..233 CDD:238200 70/236 (30%)
Car9NP_647466.2 Proteoglycan-like (PG). /evidence=ECO:0000250 32..95
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..118
Catalytic. /evidence=ECO:0000250 96..390 70/236 (30%)
alpha_CA 128..370 CDD:294017 70/236 (30%)