Protein Alignment CAH3 and cah-6

DIOPT Version :10

• Sequence 1: NP_572497.1
• Gene: CAH3 / 31804
• FlyBaseID: FBgn0030056
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_491189.1
• Gene: cah-6 / 189049
• WormBaseID: WBGene00000284
• Length: 319
• Species: Caenorhabditis elegans
• Alignment Length: 235
• Identity: 59/235 - (25%)
• Similarity: 111/235 - (47%)
• Gaps: 11/235 - (4%)

  Fly     4 QSPIEI---SNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQD 65
            ||||:|   .....||:.:.   .:...:|..|..:..|.|.|  :...:......:....|.::
 Worm    68 QSPIDIVPVITAFGEHLQNA---HFEVTYESTGEFKAVNDGNS--IWLMREGNSSELAISFLPEE 127

  Fly    66 MYVFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLAVVAFFIQACG 130
            .|..:.::|||:....:|.|||:.|:.|:.|.|.:|.|:::....:|..:|:|:..:|.|:....
 Worm   128 QYHLDAVNFHWATEPMNGSEHTIGGVGYAGEMHLIHRNTRFATMADALKQPNGVIAIAVFLNESH 192

  Fly   131 EKDCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVTWIIYR 195
            :.:......|....:::.|.........|..::..:.|.:|.::.|:||.||.|:.|:|.||:.|
 Worm   193 DDNAVFSPLINLLPQVIYKGSECKLCSFDFQTFFPVAEKTKEFWMYEGSETTDPFRETVNWIVIR 257

  Fly   196 TPIYVSRGQVQVFRNLQSCPKDE--SKKI-VNNYREIQRP 232
            ..:.:|..|:...|.:::...||  |.|: :...|.||.|
 Worm   258 AALPISSHQLDKLREVRAGRYDEEFSDKVPMKPLRPIQNP 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CAH3	NP_572497.1	alpha_CA	4..233	CDD:238200	59/235 (25%)
cah-6	NP_491189.1	alpha_CARP_receptor_like	56..304	CDD:239396	59/235 (25%)