Protein Alignment CAH3 and cah-1

DIOPT Version :10

• Sequence 1: NP_572497.1
• Gene: CAH3 / 31804
• FlyBaseID: FBgn0030056
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_001309492.1
• Gene: cah-1 / 186231
• WormBaseID: WBGene00000279
• Length: 303
• Species: Caenorhabditis elegans
• Alignment Length: 238
• Identity: 69/238 - (28%)
• Similarity: 109/238 - (45%)
• Gaps: 22/238 - (9%)

  Fly     3 VQSPIEISNRAIEHIDDVDPLEYHGHWEPVG------VARVQNTGTSAMVT--FSKRKQQPYIIG 59
            :||||:|         ..|.|.:....:||.      |:...|||....|.  :|.:|....|..
 Worm    58 LQSPIDI---------QPDRLLFDASVKPVRLDKLPVVSEFVNTGQMVRVRIGYSSKKPSVNITS 113

  Fly    60 GALEQDMYVFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSK-YKDFTEAKNKPDGLAVVA 123
            |.|....|..:::.||....:|:|.|||:.|.::.||...|.||:. |.:||.|...|.|:|:::
 Worm   114 GPLYGYRYRVQRIDFHMGRKNENGSEHTINGRRFPMEVQLVAYNTDLYPNFTSASKSPHGIAILS 178

  Fly   124 FFIQACGEKDCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFES 188
            ..:. .|.:...|..|:|.....:........| :|...| .|...::...||:||||:....|:
 Worm   179 VLVD-FGPETNQELIKLTIATASISYKDQRVQL-ADFEPW-RLLPFTRDIITYEGSLTSPGCHET 240

  Fly   189 VTWIIYRTPIYVSRGQVQVFRNLQ-SCPKDESKKIVNNYREIQ 230
            |||||...||::.:...:.:.:|. |....|...:..|:|:||
 Worm   241 VTWIILNQPIFIKKEHFEEWSHLYLSMEGAEKVPVAPNFRKIQ 283

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CAH3	NP_572497.1	alpha_CA	4..233	CDD:238200	69/237 (29%)
cah-1	NP_001309492.1	alpha_CARP_X_XI_like	39..295	CDD:239395	69/238 (29%)