Protein Alignment CAH3 and cah-2

DIOPT Version :10

• Sequence 1: NP_572497.1
• Gene: CAH3 / 31804
• FlyBaseID: FBgn0030056
• Length: 250
• Species: Drosophila melanogaster
• Sequence 2: NP_495567.3
• Gene: cah-2 / 174218
• WormBaseID: WBGene00000280
• Length: 337
• Species: Caenorhabditis elegans
• Alignment Length: 260
• Identity: 76/260 - (29%)
• Similarity: 116/260 - (44%)
• Gaps: 28/260 - (10%)

  Fly     3 VQSPIEISNRAIEHIDDVDPLEYHGHWEPVGV------ARVQNTGTSAMVTFSKRKQQP--YIIG 59
            :|||:.|         |...|.|..|..|:.:      |..:|||...:||......:|  .|.|
 Worm    35 MQSPVNI---------DPSQLLYDPHLMPINIEGNIVEAVFENTGQLPVVTVKDLPNRPTINITG 90

  Fly    60 GALEQDMYVFEQL--HFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSK-YKDFTEAKNKPDGLAV 121
            |......|...|:  ||..:|..|.|.|||::.:::..|...:.|||. |.:|:.|...|.||..
 Worm    91 GPTMPYRYKLHQISVHFGRADEGEKGSEHTVDRVRFPAEIQLLAYNSALYPNFSVAMTSPRGLLA 155

  Fly   122 VAFFIQACGEKDCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYF 186
            |:..:. .|:....|.:::|...:.:.....:.:|.....|  .|...:.||.||:||||.....
 Worm   156 VSVIVD-IGKTTSVELRRLTVASQSINYKGQTTNLTDFQPS--ALLPKTSHYVTYEGSLTFPGCH 217

  Fly   187 ESVTWIIYRTPIYVSRGQVQVFRNLQSCPKDESKKIVNNY-REIQRPHKDPEIFFAR-NTNPKSK 249
            |:|||:|...|||::...:|::..:|   |.|:|:...:| ....||.|.......| |.|..||
 Worm   218 ETVTWVILNNPIYITNDDLQIWNEMQ---KTETKQPEPSYMTPAYRPLKSLNGRLVRTNINVGSK 279

  Fly   250  249
             Worm   280  279

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CAH3	NP_572497.1	alpha_CA	4..233	CDD:238200	69/240 (29%)
cah-2	NP_495567.3	alpha_CARP_X_XI_like	16..275	CDD:239395	73/254 (29%)