DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and CAH3

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_313941.4 Gene:CAH3 / 1274749 VectorBaseID:AGAMI1_004364 Length:257 Species:Anopheles gambiae


Alignment Length:250 Identity:148/250 - (59%)
Similarity:189/250 - (75%) Gaps:3/250 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VQSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMY 67
            |||||.::.|:....|.:.||:|.|||:.:|.|::.|||:|||:|||.|..:|:||||.| .:.|
Mosquito     9 VQSPIALNQRSTVIRDGIQPLDYFGHWDGLGKAKMVNTGSSAMITFSDRPFRPFIIGGVL-GNKY 72

  Fly    68 VFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLAVVAFFIQACGEK 132
            :||||||||...|.|||||||||..|||||||||||:||..|.||.:|||||||:.||:||.|..
Mosquito    73 IFEQLHFHWGIGDGSGCEHTLEGSTYSMEAHAVHYNAKYGSFAEAVDKPDGLAVLGFFVQAYGND 137

  Fly   133 DCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVTWIIYRTP 197
            |||.|.||..|::.::.......:|:|||:|:|:|||::|||||||||||.||||||||::|:||
Mosquito   138 DCPAFDKIVAGLQYIRSPDAQTEIDADCLAWMGMQELNRHYYTYKGSLTTPPYFESVTWLVYKTP 202

  Fly   198 IYVSRGQVQVFRNLQSCPKDESKKIVNNYREIQRPHKDPEIFFARNTNP--KSKL 250
            ||||..|::.||.||:||||.|||||||:|.:|.|.:.||:.|.||.:|  .|||
Mosquito   203 IYVSSKQLEAFRQLQACPKDSSKKIVNNFRSVQVPQQVPEVVFVRNNHPVVLSKL 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 137/228 (60%)
CAH3XP_313941.4 None

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