DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and CAH2

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_001687895.2 Gene:CAH2 / 1269682 VectorBaseID:AGAMI1_003409 Length:391 Species:Anopheles gambiae


Alignment Length:246 Identity:86/246 - (34%)
Similarity:132/246 - (53%) Gaps:18/246 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            ||||.|::..::.: ::.||.:.|.........:.|.|.:.:||. :.:..|.:.||.| ..:|.
Mosquito    80 QSPININSLDVKKV-NLPPLVFQGFDVSPRETNLTNNGHTVVVTM-ESEVTPTVSGGPL-TGVYE 141

  Fly    69 FEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLAVVAFFIQACGEKD 133
            :.||||||.|.|..|.|..::..::.||.|.|.:..:||:...|.|.||||.|:|||.:...: |
Mosquito   142 YSQLHFHWGDNDTFGSEDMIDNHRFPMELHVVFFKQEYKNARTALNHPDGLTVLAFFFEIAPD-D 205

  Fly   134 CPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQELSK----HYYTYKGSLTTAPYFESVTWIIY 194
            .|.:::..|.:..|...|.||..|:.    ..|::|..    |||||.|||||.|..|.||||.:
Mosquito   206 NPMYQEFIELLGNVTGSHLSARFDTP----PSLKDLIADDLLHYYTYDGSLTTPPCSEVVTWIDF 266

  Fly   195 RTPIYVSRGQVQVFRNLQSCPKDESKKIVNNYREIQRPHKDPEIFFARNTN 245
            :.||.:|..|||.||.|::   :|...:.:|:|.:| |..|..:.:  ||:
Mosquito   267 KEPILLSHAQVQAFRALEN---EEGHPLTHNFRPVQ-PLGDRVVLY--NTD 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 82/232 (35%)
CAH2XP_001687895.2 None

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