DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and Car5a

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_031634.2 Gene:Car5a / 12352 MGIID:101946 Length:299 Species:Mus musculus


Alignment Length:240 Identity:81/240 - (33%)
Similarity:121/240 - (50%) Gaps:16/240 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            ||||.|..:...:...:.||..  .::......:.|||....|.|....:...|.||.| .:.|.
Mouse    58 QSPINIQWKDSVYDPQLAPLRV--SYDAASCRYLWNTGYFFQVEFDDSCEDSGISGGPL-GNHYR 119

  Fly    69 FEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNS-KYKDFTEAKNKPDGLAVVAFFIQACGEK 132
            .:|.||||...||.|.||.::|..|..|.|.||:|| ||:::.:|....:||||:..|::.....
Mouse   120 LKQFHFHWGATDEWGSEHAVDGHTYPAELHLVHWNSTKYENYKKASVGENGLAVIGVFLKLGAHH 184

  Fly   133 DCPEFKKITEGIRIVQKIHTSASL---DSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVTWIIY 194
            ..  .:|:.:.:..|:...|..::   |..|     |....:.|:||.|||||.|..||||||:.
Mouse   185 QA--LQKLVDVLPEVRHKDTQVAMGPFDPSC-----LLPACRDYWTYPGSLTTPPLAESVTWIVQ 242

  Fly   195 RTPIYVSRGQVQVFRNLQSCPKDESKKI-VNNYREIQRPHKDPEI 238
            :||:.||..|:..||.|....:.|.:.: |||||.:| |.:|.::
Mouse   243 KTPVEVSPSQLSTFRTLLFSGRGEEEDVMVNNYRPLQ-PLRDRKL 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 79/233 (34%)
Car5aNP_031634.2 alpha_CA_V 55..290 CDD:239392 81/240 (34%)

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