DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and Car2

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_033931.4 Gene:Car2 / 12349 MGIID:88269 Length:260 Species:Mus musculus


Alignment Length:244 Identity:83/244 - (34%)
Similarity:123/244 - (50%) Gaps:25/244 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            |||::|.....:|...:.||..  .::......:.|.|.|..|.|...:....:.||.| .|.|.
Mouse    28 QSPVDIDTATAQHDPALQPLLI--SYDKAASKSIVNNGHSFNVEFDDSQDNAVLKGGPL-SDSYR 89

  Fly    69 FEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLAVVAFFIQACGEKD 133
            ..|.||||...|..|.|||:...||:.|.|.||:|:||.||.:|..:||||||:..|:       
Mouse    90 LIQFHFHWGSSDGQGSEHTVNKKKYAAELHLVHWNTKYGDFGKAVQQPDGLAVLGIFL------- 147

  Fly   134 CPEFKKITEGI-RIVQKIHT-------SASLDSDCLSWIGLQELSKHYYTYKGSLTTAPYFESVT 190
              :....::|: ::::.:|:       :|..:.|..|   |...:..|:||.|||||.|..|.||
Mouse   148 --KIGPASQGLQKVLEALHSIKTKGKRAAFANFDPCS---LLPGNLDYWTYPGSLTTPPLLECVT 207

  Fly   191 WIIYRTPIYVSRGQVQVFRNLQSCPK-DESKKIVNNYREIQRPHKDPEI 238
            ||:.|.||.||..|:..||.|....: |..:.:|:|:|..| |.|:.:|
Mouse   208 WIVLREPITVSSEQMSHFRTLNFNEEGDAEEAMVDNWRPAQ-PLKNRKI 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 80/237 (34%)
Car2NP_033931.4 alpha_CA 1..259 CDD:469577 83/244 (34%)

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