DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and LOC11175669

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_003436099.2 Gene:LOC11175669 / 11175669 VectorBaseID:AGAMI1_012162 Length:290 Species:Anopheles gambiae


Alignment Length:252 Identity:90/252 - (35%)
Similarity:123/252 - (48%) Gaps:38/252 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEI--SNRAIEHIDDVDPLEYH-GHWEPVGVARVQNTGTSAMVTF--SKRKQQPYIIGGALE 63
            ||||:|  |...:..:|...||... |..:||.:. |.|.|.:|..||  ||..::|.:|||.|.
Mosquito    48 QSPIDIVRSAATLPSLDHAAPLLLEGGARKPVSIV-VTNNGHTAQYTFHWSKESERPTLIGGPLP 111

  Fly    64 QDM-YVFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLAVVAFFIQ 127
            ... ||.|||||||...:..|.|||.:|:.::.|||.|.|..:|..|.:|...|||||||....:
Mosquito   112 FGAPYVLEQLHFHWGADNGRGSEHTFDGVAWAAEAHFVFYKQEYGSFEQAVTHPDGLAVVGALYE 176

  Fly   128 ACGEKDCPEFKKITEGIRIVQKIHTSAS-----------LDSDCL--SWIGLQELSKHYYTYKGS 179
            ..|:|..|..|....    :.||..:.|           |||...  ||:       .||:|.||
Mosquito   177 VGGDKVKPGAKWAVP----LPKIRPAGSTTTLEGGAVFNLDSVAPGGSWL-------RYYSYAGS 230

  Fly   180 LTTAPYFESVTWIIYRTPIYVSRGQVQVFRNLQSCPKDESKKIVNNYREIQ----RP 232
            |||.|..||||||:......:::..:...|||:.   ...:.:|:|:|.:|    ||
Mosquito   231 LTTPPCAESVTWIVRDGTSPIAQKDLDELRNLRD---SADQPLVDNFRPVQPLNGRP 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 90/252 (36%)
LOC11175669XP_003436099.2 None

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