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Protein Alignment CAH3 and si:ch211-173d10.4
DIOPT Version :9
Sequence 1: | NP_001259349.1 |
Gene: | CAH3 / 31804 |
FlyBaseID: | FBgn0030056 |
Length: | 250 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_021336146.1 |
Gene: | si:ch211-173d10.4 / 108191769 |
ZFINID: | ZDB-GENE-121214-331 |
Length: | 234 |
Species: | Danio rerio |
Alignment Length: | 194 |
Identity: | 58/194 - (29%) |
Similarity: | 83/194 - (42%) |
Gaps: | 34/194 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 59 GGALEQDMYVFEQLHFHWSDCD---ESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLA 120
||.|:. .|...|.||||...| :.|.||:|...::.:|.|.|...:...| :.|...|||.|
Zfish 24 GGGLKH-KYTVLQFHFHWGGRDPRQQPGSEHSLNRHRWPVEMHIVSRRTDLND-SAASRVPDGFA 86
Fly 121 VVAFFIQACGEKDCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQEL-----SKHYYTYKGSL 180
|:.|||..........::...|.::.:.:...:..:..| |.||:| ...||.|.|||
Zfish 87 VMGFFIDGKENVTSQVWENFMEYLQKIPRKGDTVRITDD----ISLQQLLTGVDLSRYYRYSGSL 147
Fly 181 TTAPYFESVTWIIYRTPIYVSRGQV---------QVFRNLQSCPK-----------DESKKIVN 224
||.|..|:|.|.:::.||.:|..|: .|:|..||..| |.|...||
Zfish 148 TTPPCDEAVQWTVFKDPIIISTDQLLRFQTVSFGYVYRPQQSLNKRTVYASAALAADASSSAVN 211
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1377476at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000047 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR18952 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.020 |
|
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