DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and ca3

DIOPT Version :9

Sequence 1:NP_001259349.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_002939197.2 Gene:ca3 / 100496328 XenbaseID:XB-GENE-1007186 Length:262 Species:Xenopus tropicalis


Alignment Length:250 Identity:87/250 - (34%)
Similarity:123/250 - (49%) Gaps:37/250 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDP--LEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDM 66
            |||||:..|.|:|...:.|  ..||    |.....|.|.||:..|.|.....:..|..|.: ...
 Frog    30 QSPIELLTRYIKHDPTLRPWTSTYH----PSTSLTVVNDGTTCRVVFDDSTDKSVIKDGPM-NGT 89

  Fly    67 YVFEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSKYKDFTEAKNKPDGLAVVAFFIQACGE 131
            |...||.|||...|:.|.||.::|.:|:.|.|.:|:||||.:.||||..|||:|::|.|::....
 Frog    90 YRLRQLQFHWGSSDDHGSEHVIDGFRYAGEMHFIHWNSKYDNITEAKKHPDGVAIIAVFLKIGKA 154

  Fly   132 KDCPEFKKITEGIRIVQKIHTSASLDSDCLSWIG------------LQELSKHYYTYKGSLTTAP 184
            |  |..|.:.|.:              ||:...|            |...|:.|:||:||.||.|
 Frog   155 K--PHLKLVLEAL--------------DCIKNKGKKAHFTDFDPTILFPSSRDYWTYQGSFTTPP 203

  Fly   185 YFESVTWIIYRTPIYVSRGQVQVFRNLQSCPKDESK-KIVNNYREIQRPHKDPEI 238
            ..|.|||::...||.||..|::.||::.|..:.|.: .:|:|:|..| |.|..||
 Frog   204 CEECVTWLLLSEPITVSPEQMEKFRSVYSTLEGEIECHMVDNFRPPQ-PVKGREI 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_001259349.1 alpha_CA 4..233 CDD:238200 83/243 (34%)
ca3XP_002939197.2 alpha_CA 4..261 CDD:412109 86/249 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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