DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and ca10

DIOPT Version :9

Sequence 1:NP_001259349.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_031750638.1 Gene:ca10 / 100493207 XenbaseID:XB-GENE-949649 Length:328 Species:Xenopus tropicalis


Alignment Length:246 Identity:67/246 - (27%)
Similarity:107/246 - (43%) Gaps:40/246 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYIIGGALEQDMYV 68
            |||:.|....:.....:.||..:.....|. ..:.|||....:...| :....|.||.|... :.
 Frog    66 QSPVNIETSHMIFDPFLTPLRINTGGRKVS-GTMYNTGRHVSLRLDK-EHLVNISGGPLTYS-HR 127

  Fly    69 FEQLHFHWSDCDESGCEHTLEGMKYSMEAHAVHYNSK-YKDFTEAKNKPDGLAVVAFFIQACGEK 132
            .|::..|:...|..|.||.|.|..:|.|...:|||.: |.:.|:|...|:||.|::.||      
 Frog   128 LEEIRLHFGSEDGQGSEHLLNGQAFSGEVQLIHYNHELYTNVTDAAKSPNGLVVISIFI------ 186

  Fly   133 DCPEFKKITEG--------------IRIVQKIHTSASLDSDCLSWIGLQEL---SKHYYTYKGSL 180
                  |:|:.              .||..|      .|:..|..:.::|:   :..:.||.||:
 Frog   187 ------KVTDSSNLFLNRMLNRDTITRITYK------NDAYLLQGLNIEEIYPETSSFITYDGSM 239

  Fly   181 TTAPYFESVTWIIYRTPIYVSRGQVQVFRNL-QSCPKDESKKIVNNYREIQ 230
            |..|.:|:.:|||...|||::|.|:...|.| |:.|......:.:|:|.:|
 Frog   240 TIPPCYETASWIIMNKPIYITRMQMHSLRLLSQNQPSQIFSSMSDNFRPVQ 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_001259349.1 alpha_CA 4..233 CDD:238200 67/246 (27%)
ca10XP_031750638.1 alpha_CARP_X_XI_like 46..302 CDD:239395 67/246 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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