DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH3 and ca14

DIOPT Version :10

Sequence 1:NP_572497.1 Gene:CAH3 / 31804 FlyBaseID:FBgn0030056 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_001103521.1 Gene:ca14 / 100126213 XenbaseID:XB-GENE-855636 Length:343 Species:Xenopus tropicalis


Alignment Length:247 Identity:78/247 - (31%)
Similarity:119/247 - (48%) Gaps:42/247 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QSPIEISNRAIEHIDDVDPLEYHGHWEPVGVARVQNTGTSAMVTFSKRKQQPYII---GGALEQD 65
            ||||.|....|.:.:.:.|:|..|:..|                    ..||:.:   |.::|..
 Frog    44 QSPINIQTSNISYDESLPPIEPEGYNTP--------------------GNQPFTLTNNGHSVELS 88

  Fly    66 M------------YVFEQLHFHW-SDCDESGCEHTLEGMKYSMEAHAVHYNS-KYKDFTEAKNKP 116
            :            :...|||.|| |...::|.||.|:|.::..|.|.||||| ||.|.:||||||
 Frog    89 LPSSMTLRGLPNTFKAAQLHLHWGSPAKQAGSEHRLDGEEFPAELHIVHYNSDKYADISEAKNKP 153

  Fly   117 DGLAVVAFFIQACGEKDCPEFKKITEGIRIVQKIHTSASLDSDCLSWIGLQELSKHYYTYKGSLT 181
            |||||:..|.: .|..|.|.:..|...:..::....:.|:.|..:..: |.|..:.|:.|:||||
 Frog   154 DGLAVLGVFFE-IGATDNPAYANILHHLDNIRYKDQTVSVPSFNVRHL-LPENLEEYFRYQGSLT 216

  Fly   182 TAPYFESVTWIIYRTPIYVSRGQVQVFR-NLQSCPKDE--SKKIVNNYREIQ 230
            |.|.::||.|.::..|:.:||.|::..: .|.|....|  .:.:.||.||.|
 Frog   217 TPPCYQSVLWTVFYHPVEISRSQLEKLQTTLYSTTATEVPPEVLGNNVREAQ 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH3NP_572497.1 alpha_CA 4..233 CDD:238200 78/247 (32%)
ca14NP_001103521.1 alpha_CA 28..279 CDD:469577 78/247 (32%)

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