DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42272 and VPS62

DIOPT Version :9

Sequence 1:NP_729101.2 Gene:CG42272 / 318020 FlyBaseID:FBgn0259167 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_011657.1 Gene:VPS62 / 853042 SGDID:S000003373 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:398 Identity:91/398 - (22%)
Similarity:156/398 - (39%) Gaps:125/398 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 VVPTTPPTTTRGVYIPVSIDPLE--ERNDTIRRSSRLFPLFQRVKRESPTVPQYNQLNEYEELVM 294
            ::.:|||           :.|.|  |.|.::::...: |  |.|...||.:..|:     ||...
Yeast    58 ILSSTPP-----------LHPSEVTEDNKSLKQRGNV-P--QYVIDNSPLLHLYS-----EEKYW 103

  Fly   295 EATQKPSVQQDSEPEPENGVPVNNFIANLADNVKF--------------SGGTYPD--DNLEENS 343
            .|..|..|::....:......:|..:.:|:|..::              |.|||..  |:.::..
Yeast   104 PADVKDFVKRFQLRDHSGEKIINEHLRDLSDLQEYYSVELENGTWGRVSSEGTYMTSLDDFDKGP 168

  Fly   344 ---IGQAPEKEEGPGKGKLP----------GFHVTYWM-FYPYSQGKTMCTVSLGPLGRIPFPAV 394
               :|:.||...|..| |.|          |:...:|. |||::.|..:       :|..|:   
Yeast   169 DWLLGEQPEYGTGHIK-KAPAVLFVVDKGNGWVDAFWFYFYPFNWGPYI-------MGSGPW--- 222

  Fly   395 YGYCLGNRKDIGSHVGDWEH-MSLYFNGDAEPQAMYVSAHDAGAYYSYNRLTGSFEFRRQETRKG 458
                       |:||||||| :..::.|  |||.:::|||..|:.|.:..:......||.:   |
Yeast   223 -----------GNHVGDWEHSLVRFYKG--EPQYLWMSAHGGGSAYKFEAIEKIKRLRRVD---G 271

  Fly   459 ILQRPNFPKTVTTFKNHPVLFAAKGSHGLWTAPGKHRFVKVARLYDINGFGTPWN-------TWK 516
            .|......|        |::|:|:|:|..:.:.|:|       .:|:..|..|.:       .|.
Yeast   272 KLTNEVIKK--------PLIFSARGTHAHYASVGQH-------AHDVPFFFMPLSDFTDRGPLWD 321

  Fly   517 AVDISYENLRSYGRSLVP----------DWLTYRGKWG-------NPKSNCHPFRRIGLNFCEFT 564
            .....|....:.|..:.|          :||:::|.||       :|:....||:      .::.
Yeast   322 PSLNYYAYTVTVGEKMTPCGAEETKMGLEWLSFKGAWGDKQLRPRDPRQKWCPFQ------WKYI 380

  Fly   565 DGPTGIPL 572
            |||.| ||
Yeast   381 DGPKG-PL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42272NP_729101.2 DUF946 <367..>437 CDD:283705 22/71 (31%)
VPS62NP_011657.1 Vps62 <202..>297 CDD:399239 34/128 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346240
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46834
orthoMCL 1 0.900 - - OOG6_107691
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3201
TreeFam 00.000 Not matched by this tool.
65.740

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