DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42272 and VPS62

DIOPT Version :10

Sequence 1:NP_729101.2 Gene:CG42272 / 318020 FlyBaseID:FBgn0259167 Length:584 Species:Drosophila melanogaster
Sequence 2:NP_011657.1 Gene:VPS62 / 853042 SGDID:S000003373 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:398 Identity:91/398 - (22%)
Similarity:156/398 - (39%) Gaps:125/398 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 VVPTTPPTTTRGVYIPVSIDPLE--ERNDTIRRSSRLFPLFQRVKRESPTVPQYNQLNEYEELVM 294
            ::.:|||           :.|.|  |.|.::::...: |  |.|...||.:..|:     ||...
Yeast    58 ILSSTPP-----------LHPSEVTEDNKSLKQRGNV-P--QYVIDNSPLLHLYS-----EEKYW 103

  Fly   295 EATQKPSVQQDSEPEPENGVPVNNFIANLADNVKF--------------SGGTYPD--DNLEENS 343
            .|..|..|::....:......:|..:.:|:|..::              |.|||..  |:.::..
Yeast   104 PADVKDFVKRFQLRDHSGEKIINEHLRDLSDLQEYYSVELENGTWGRVSSEGTYMTSLDDFDKGP 168

  Fly   344 ---IGQAPEKEEGPGKGKLP----------GFHVTYWM-FYPYSQGKTMCTVSLGPLGRIPFPAV 394
               :|:.||...|..| |.|          |:...:|. |||::.|..:       :|..|:   
Yeast   169 DWLLGEQPEYGTGHIK-KAPAVLFVVDKGNGWVDAFWFYFYPFNWGPYI-------MGSGPW--- 222

  Fly   395 YGYCLGNRKDIGSHVGDWEH-MSLYFNGDAEPQAMYVSAHDAGAYYSYNRLTGSFEFRRQETRKG 458
                       |:||||||| :..::.|  |||.:::|||..|:.|.:..:......||.:   |
Yeast   223 -----------GNHVGDWEHSLVRFYKG--EPQYLWMSAHGGGSAYKFEAIEKIKRLRRVD---G 271

  Fly   459 ILQRPNFPKTVTTFKNHPVLFAAKGSHGLWTAPGKHRFVKVARLYDINGFGTPWN-------TWK 516
            .|......|        |::|:|:|:|..:.:.|:|       .:|:..|..|.:       .|.
Yeast   272 KLTNEVIKK--------PLIFSARGTHAHYASVGQH-------AHDVPFFFMPLSDFTDRGPLWD 321

  Fly   517 AVDISYENLRSYGRSLVP----------DWLTYRGKWG-------NPKSNCHPFRRIGLNFCEFT 564
            .....|....:.|..:.|          :||:::|.||       :|:....||:      .::.
Yeast   322 PSLNYYAYTVTVGEKMTPCGAEETKMGLEWLSFKGAWGDKQLRPRDPRQKWCPFQ------WKYI 380

  Fly   565 DGPTGIPL 572
            |||.| ||
Yeast   381 DGPKG-PL 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42272NP_729101.2 Vps62 <367..>437 CDD:461828 22/71 (31%)
VPS62NP_011657.1 Vps62 <202..>297 CDD:461828 34/128 (27%)

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