Protein Alignment CG42272 and Prp39

DIOPT Version :10

• Sequence 1: NP_729101.2
• Gene: CG42272 / 318020
• FlyBaseID: FBgn0259167
• Length: 584
• Species: Drosophila melanogaster
• Sequence 2: NP_733256.2
• Gene: Prp39 / 43399
• FlyBaseID: FBgn0039600
• Length: 1066
• Species: Drosophila melanogaster
• Alignment Length: 612
• Identity: 115/612 - (18%)
• Similarity: 207/612 - (33%)
• Gaps: 184/612 - (30%)

  Fly    31 AQQAQQMVQQQQ-QQLPAGVAATTAAATSPASSNMRLLNATSAGVAATFIDNTSSNASRNDHMVQ 94
            |.:.:.:|.:.. ::..:|..|.:.||:.|..|..|                   .:.||   ||
  Fly     2 ASEGENVVMESPGRRTRSGRKAASPAASLPTRSTRR-------------------TSKRN---VQ 44

  Fly    95 NNENPASFEQQTLQLQQQQQ----QATVQYAHISPLDKEVVERLIKQWAPIVWLAPEEKFMPLGV 155
            .:::....|:|.:.:|::::    ..|.:...:.|..:|...::...    |.:.|.|   ..||
  Fly    45 LSDHEEEAEEQVVMVQEEEEPFRGTNTAEAPALEPQFEETQHQIEDD----VEMLPAE---AAGV 102

  Fly   156 EEFLQYVHPMDKDSSFRPGVPFREYSTKSHLVTNNEVQELLGND-----KSFLYGRNPN------ 209
            :|         |.|||    ||...: :.|..|:::::|..|..     .:.|.|.|.|
  Fly   103 DE---------KSSSF----PFGTVA-ELHSETSDDIKETRGQAGVDTLLASLAGDNANSLPSVG 153

  Fly   210 --------EKAVPIYGVVNLCPSTRAPAMPVVPTTPPTTTRGVYIPVSIDPLEERNDTIRR---- 262
                    :||...|.|.:|     .|.|..:.::..::::.. |...:...:..|.||..
  Fly   154 GNDESDNVKKADFEYNVDSL-----QPQMEKMNSSEDSSSQHA-IAEDLADADTSNATIVNTEIV 212

  Fly   263 SSRLFPLFQRVKRESPTVPQYNQLNEYEELVMEATQKPSVQQDSEPEPENGVPVNNF-------- 319
            |....||        |:.|:.|...|..:..:.|.|:..:.:|:|...|:.:|.:|.
  Fly   213 SEDELPL--------PSKPEINDAEEVSDEELPAPQRAELPEDAEVISEDELPASNNNNTATEPK 269

  Fly   320 --IANLADNVKFSGGTYPDDNLEENSIGQAPEKEEGPGKGKLPGFHVTYWMFYPYSQG------- 375
              :...|:|.........|.:..|:|......::..||.              |.|:.
  Fly   270 APLKRKAENESVKSTEDKDASSHESSTKDKSSEQYNPGS--------------PTSESNDAQPSE 320

  Fly   376 KTMCTVSLGP--------------------------LGRIPFPAVYGYCLGNRKDIGSHVGDWEH 414
            |.:......|                          ..|...|.:..|....::|.....| |.:
  Fly   321 KKLKVEESEPKEKKKEKERDKDKEKDKDKDNNKDKEKERKKLPDLDKYWRAVKEDSTDFTG-WTY 384

  Fly   415 MSLYFNGDAEPQAMYVSAHDA--GAY---YSYNRLTGSFEFRRQETRKGILQRPN---------- 464
            :..|.:.:::.:|.. .|:|.  ..|   |.|.|     ::...|.||||  :.|
  Fly   385 LLQYVDNESDAEAAR-EAYDTFLSHYPYCYGYWR-----KYADYEKRKGI--KANCYKVFERGLE 441

  Fly   465 -FPKTVTTFKNHPVLFAAKGSHGLWTAPGKHRFVKVARLYDINGFGTPWNTWKAVD--ISYEN-- 524
             .|.:|..:.::  |...|.:||     ....||:......:...|..:.:.|..|  |.:||
  Fly   442 AIPLSVDLWIHY--LMHVKSNHG-----DDETFVRSQYERAVKACGLEFRSDKLWDAYIRWENES 499

  Fly   525 ------LRSYGRSLVPDWLTYRGKWGN 545
                  ::.|.|.|......|.|.:.|
  Fly   500 KRYHRVVQIYDRLLAIPTQGYNGHFDN 526

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42272	NP_729101.2	Vps62	<367..>437	CDD:461828	14/104 (13%)
Prp39	NP_733256.2	PHA03169	11..>269	CDD:223003	62/314 (20%)
		RNA14	359..>535	CDD:227438	40/184 (22%)
		Spy	755..>962	CDD:443119
		TPR repeat	884..915	CDD:276808