Sequence 1: | NP_729101.2 | Gene: | CG42272 / 318020 | FlyBaseID: | FBgn0259167 | Length: | 584 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101496.2 | Gene: | Prpf39 / 314171 | RGDID: | 1308702 | Length: | 664 | Species: | Rattus norvegicus |
Alignment Length: | 380 | Identity: | 66/380 - (17%) |
---|---|---|---|
Similarity: | 119/380 - (31%) | Gaps: | 147/380 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 282 QYNQLNEY-----------EELVME----ATQKPSV-QQDSEPEPENGVPVN---NFIANLAD-N 326
Fly 327 VKFSGGTYPDD------NLEENSIGQAPEKEEGPGKGKLPGFHVTYWMF---YPYSQGKTMCTVS 382
Fly 383 LGPLGRIPFPAVYGYC-----LGNRKD---------------IGSHVGDWEHMSLYFN------- 420
Fly 421 -GDAEPQA------------------------MYVS-AHDAGAYYS----YNRLTG------SFE 449
Fly 450 FRRQETRKGILQRPNFPKTVTT----FKNHPVLFAAKGSHGLWTAPG------------------ 492
Fly 493 -----KHRFVKVAR---LYDINGFGTPWNTWKAVDISYENLRSYGRSLVPDWLTY 539 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42272 | NP_729101.2 | DUF946 | <367..>437 | CDD:283705 | 22/125 (18%) |
Prpf39 | NP_001101496.2 | RNA14 | 67..>537 | CDD:227438 | 51/315 (16%) |
TPR repeat | 452..480 | CDD:276809 | |||
TPR repeat | 485..519 | CDD:276809 | |||
TPR repeat | 524..554 | CDD:276809 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166336880 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |