DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and YOX1

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_013685.1 Gene:YOX1 / 854981 SGDID:S000004489 Length:385 Species:Saccharomyces cerevisiae


Alignment Length:150 Identity:39/150 - (26%)
Similarity:65/150 - (43%) Gaps:25/150 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 NTRKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQ 127
            |....||:|...:..:|.:|:|.|.|...|....|.|:|...::.|..||:||:|:|...::|..
Yeast   172 NAPLARRKRRRTSSQELSILQAEFEKCPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVKRQRI 236

  Fly   128 QQQQSNS------------------LSSSKNASGGGSGNSCSSSSANS-------RSNSNNNGSS 167
            ...:|.:                  |:|...|.....|:|||.||::|       |.:.:.|..|
Yeast   237 ATSKSTTIIQTVSPPSPPLDVHATPLASRVKADILRDGSSCSRSSSSSPLENTPPRPHHSLNRRS 301

  Fly   168 SNNNTQSSGGNNSNKSSQKQ 187
            |..:.:.|.....:.:.||:
Yeast   302 STPSIKRSQALTFHLNPQKK 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 19/54 (35%)
YOX1NP_013685.1 COG5576 126..267 CDD:227863 24/94 (26%)

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