DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and HDG7

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001332093.1 Gene:HDG7 / 835293 AraportID:AT5G52170 Length:687 Species:Arabidopsis thaliana


Alignment Length:402 Identity:80/402 - (19%)
Similarity:126/402 - (31%) Gaps:131/402 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KQRRERTTF---TRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQ 127
            |:::.:|.:   |..|:..||:.|.:..:|:...|.|:..|:.|...:::.||:|||.:.:.||:
plant    53 KKKKRKTKYHRHTSYQIQELESFFKECPHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLE 117

  Fly   128 Q------QQQSNSL----SSSKNASGGGSGNSCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNK 182
            :      :|::..|    |..|.:..|.....|..:..        .|..|....|....|...|
plant   118 RHENVILKQENEKLRLENSFLKESMRGSLCIDCGGAVI--------PGEVSFEQHQLRIENAKLK 174

  Fly   183 SSQKQ---------GNSQSSQQGGGSSGGNNSNNNSAAAAASAAAAVAAAQSIKTHHSSFLSAAA 238
            ....:         |.|.|.:|  .|:||..|.:.......|...::.............|..|.
plant   175 EELDRICALANRFIGGSISLEQ--PSNGGIGSQHLPIGHCVSGGTSLMFMDLAMEAMDELLKLAE 237

  Fly   239 AAASGGTNQSANNNSN----NNNQGNSTPNSSS----------------------------SGGG 271
            ...|..:::|...:.|    :...|....||.:                            |.|.
plant   238 LETSLWSSKSEKGSMNHFPGSRETGLVLINSLALVETLMDTNKWAEMFECIVAVASTLEVISNGS 302

  Fly   272 GGSQAGGHLSAAAAAAALNVTAAHQNSSPLLPTPATSVSPVSIVCKKEHLSGGYGSSVGGGGGGG 336
            .||:.|         :.|.:.|..|..|||:|........   .||:.                 
plant   303 DGSRNG---------SILLMQAEFQVMSPLVPIKQKKFLR---YCKQH----------------- 338

  Fly   337 GASSGGLNLGVGVGVGVGVGVGVSQDLLRSPYDQLKDAGG-----------DIGAGV-------- 382
                         |.|:...|.||.|:.|. .:.||..||           |||.|.        
plant   339 -------------GDGLWAVVDVSYDINRG-NENLKSYGGSKMFPSGCIIQDIGNGCSKVTWIEH 389

  Fly   383 -----HHHHSIY 389
                 .|.||:|
plant   390 SEYEESHTHSLY 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 16/57 (28%)
HDG7NP_001332093.1 Homeodomain 61..113 CDD:459649 15/51 (29%)
START_ArGLABRA2_like 220..425 CDD:176884 41/225 (18%)

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