DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and HB21

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_179445.1 Gene:HB21 / 816370 AraportID:AT2G18550 Length:220 Species:Arabidopsis thaliana


Alignment Length:104 Identity:23/104 - (22%)
Similarity:44/104 - (42%) Gaps:23/104 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 QGMWGVNTRKQRRERTTFTRA-------------------QLDVLEALFGKTRYPDIFMREEVAL 102
            ||.....||:::|:..:...|                   |:.:||..|......:...::.:|.
plant    29 QGGEAKPTRRRKRKSKSVVVAEEGENEGNGWFRKRKLSDEQVRMLEISFEDDHKLESERKDRLAS 93

  Fly   103 KINLPESRVQVWFKNRRAKCRQQLQQQQQSNSLSSSKNA 141
            ::.|...:|.|||:||||:.:    .::..:..:..|||
plant    94 ELGLDPRQVAVWFQNRRARWK----NKRVEDEYTKLKNA 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 16/73 (22%)
HB21NP_179445.1 HOX 61..114 CDD:197696 14/52 (27%)

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