DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and uncx

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:XP_005164261.1 Gene:uncx / 798510 ZFINID:ZDB-GENE-080509-1 Length:483 Species:Danio rerio


Alignment Length:341 Identity:81/341 - (23%)
Similarity:120/341 - (35%) Gaps:128/341 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 KQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQ------ 124
            |:||.||.||..||:.||..|.::.|||:||||.:||:::|.||||||||:|||||.|:      
Zfish    99 KRRRTRTNFTGWQLEELEKAFNESHYPDVFMREALALRLDLIESRVQVWFQNRRAKWRKKENTKK 163

  Fly   125 --------------------------------QLQQQQQSNSLSSSKN---------ASGGGSGN 148
                                            :.::::|...|..|:|         ..|..|.:
Zfish   164 GPGRPAHNSHPTTCSGEPMDPEEIARRELERLEKKKRKQERRLLKSQNKLLPGDLFHTPGSDSDS 228

  Fly   149 SCSSSSANSRSNSNNNGSSSNNNTQSSGGNNSNKSSQKQGNSQSSQQGG---GSSGGNNSN--NN 208
            ..|..:.:.:|...:.|   .|.||.|......| .|.|.|:.....|.   .|..|..||  :|
Zfish   229 GLSQITDSEQSLHCDMG---RNQTQPSCDQTPQK-LQNQRNADQDASGSELDSSDSGQQSNLCSN 289

  Fly   209 SAAAA------------------------------------------------------ASAAAA 219
            |.::|                                                      .:|..:
Zfish   290 SRSSALQKLNPFSVESLLSDSRPRRKPPMDFPVPTPRPLIGKGHFLLYPITQPLGFIVPQTALKS 354

  Fly   220 VAAAQSIKTHHSSFLSAAAAAASGGTNQSANNNSNNNNQGNSTPNSSSSGGGGGSQAGGHLSAAA 284
            .|.....:.......:....|.:.|...:..|||.|||.|      :.:..|..||:|       
Zfish   355 TAPGPDTENGQKGPATDITFAGNPGHRNAKENNSVNNNSG------ARAIKGQVSQSG------- 406

  Fly   285 AAAALNVTAAHQNSSP 300
                 |::.:.|:|||
Zfish   407 -----NISCSTQSSSP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 34/54 (63%)
uncxXP_005164261.1 COG5576 <88..208 CDD:227863 38/108 (35%)
Homeodomain 101..157 CDD:459649 34/55 (62%)

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