DRSC/TRiP Functional Genomics Resources

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Protein Alignment oc and phox2ba

DIOPT Version :10

Sequence 1:NP_001356934.1 Gene:oc / 31802 FlyBaseID:FBgn0004102 Length:664 Species:Drosophila melanogaster
Sequence 2:NP_001139175.1 Gene:phox2ba / 795258 ZFINID:ZDB-GENE-090313-51 Length:155 Species:Danio rerio


Alignment Length:97 Identity:45/97 - (46%)
Similarity:61/97 - (62%) Gaps:0/97 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RKQRRERTTFTRAQLDVLEALFGKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQLQQQ 129
            |||||.||.||.|||..||..|..|:||||:.|||:..:|.|.|:||||||:|||||.|:|.:..
Zfish    11 RKQRRVRTIFTSAQLKALERAFAHTQYPDIYTREELVQEIQLTEARVQVWFQNRRAKFRKQERAA 75

  Fly   130 QQSNSLSSSKNASGGGSGNSCSSSSANSRSNS 161
            ..:.|.|.:.::....|..:.|::..:|...|
Zfish    76 SWNESSSKTHSSPSHDSSETASATDPDSTQPS 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocNP_001356934.1 Homeodomain 68..123 CDD:459649 34/54 (63%)
phox2baNP_001139175.1 Homeodomain 14..70 CDD:459649 34/55 (62%)

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